Brassica napus (rape): 106382135
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Entry
106382135 CDS
T04128
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106382135
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106382135
03041 Spliceosome [BR:
bna03041
]
106382135
Protein phosphatases and associated proteins [BR:
bna01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106382135
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106382135
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106382135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Nup35_RRM
zf_CCCH_4
PHM7_cyt
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
106382135
NCBI-ProteinID:
XP_013677552
UniProt:
A0A816KKG1
LinkDB
All DBs
Position
C2:complement(51432796..51437743)
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AA seq
889 aa
AA seq
DB search
MRETRSSALSMEISVSSPKQSVLSSSDCMSDPEEEHEISEEEDDDDRNHKHRKKEETSSQ
SLEQGSSDQAFSRPFRRNNRHFENGSEHEKRSLGAGGSGQRVQFDNQRSRSNPGRGRGSY
GSWSQRDSRFNHPVDLSSHMVPGMFGGRGLAAQTAPWPGFGMLPGVPNGGLDGFHHLQGP
LGPPLNGPINMGIPRQRCRDFEERGFCLRGDMCPMEHGINRIVVDDVQSLSQFNLPVSAP
GGPHMAASSKPVPAQFGGGNFMNTKGAHGKTNEGGMAVDGMGYGDAYPSAGGTDSYDPDQ
PLWNNSAGETSGALSAPNSHGIDENVAPVDDNNQDGAVNTCGIRESRNNQSGWGRVRNSQ
ANFKEKGDTVLNSSAGLEGQSKEISVSLYRQNNVGGSVAKVVDSSNTLNDAVNNTRTPTQ
KAMRTLFVNGVPHESNRRDLILAHFQKFGKVIDIHIPANSNRAFVQFSKREEAESALRAP
DAVMGNRFIKLWWANRDSIPDNGLSTGNGAFMKGRGVGASGGQNQIPIAAASKSNHVSLT
AKGPAFHPGGAPSSSQQPKPVGVTTGPKVTPLQQKKADTLEQLKETLRKKQEMLDQKRNE
LCKKLATLQKQETGVKDEEADEPDAKRVKVDTASNSGAAIPSPKTESSTEKKGPIKKPLS
IARPSTETPSPDSKNLKQRPYSYTTSLNTPMVNRYKLDNRTTTIKVVPPLPTGLADVAVL
KEHFSSYGEVSKVELEDNASTDSGKDQDETHNKTLAACVTFVKRSAAEKAFANARSWQEH
TLQLVWVTRQIKKENKSSSDKNNPSVSSDHLSSKNKSAASVSNDPKPEDEVKASSTEEPK
STNVSGDDNTLNEQAAKESDNDNNKSNSEFIEGAEKVAAPESNEEQMNG
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagagagacgagaagctctgcattatccatggagatttcagtttcctctccgaagcag
agcgtgttatcttcatcggattgtatgagcgaccctgaggaggagcacgagatcagcgag
gaggaggatgacgacgatcgcaaccacaagcaccgtaagaaagaagagacgagttctcag
tccttggaacaaggctcttcagatcaggctttctcgcgtcccttcaggagaaacaatagg
cattttgagaatggcagtgaacatgagaaacggtctctaggggcgggaggatcaggacaa
cgtgtacagtttgataaccaaagatcaagatcaaaccctggtagaggtagaggaagttat
ggttcttggagtcagcgtgattccaggtttaatcatcctgttgatctctcatctcatatg
gttccggggatgtttggaggaaggggactagctgctcaaaccgcaccttggcctgggttt
ggaatgcttcctggagttccgaatggtggcttggatggtttccatcacttgcaagggcct
ctaggaccgccgttaaatggtccaatcaacatgggtattcctcggcagcgatgcagagac
tttgaggaacgtgggttctgcctcagaggggacatgtgtcccatggagcatggaatcaat
cgtatcgttgttgatgatgttcagagtctatcacagttcaaccttcccgtttctgcccct
ggtggacctcatatggcagcttcttccaaaccagtgcctgcacagtttgggggtggtaat
ttcatgaatacgaaaggagctcatgggaagactaacgagggtggaatggctgttgatggt
atgggttatggtgatgcatatcctagtgcaggtggaactgattcttacgatcctgatcaa
cctttgtggaataacagtgctggtgaaacttcaggggcattatctgcaccaaattctcat
gggatagatgagaatgtcgctccagtggatgacaataaccaagatggcgctgtaaataca
tgtggtattcgagaatcaagaaacaatcagtcgggttggggcagagtgcgtaatagtcaa
gcaaatttcaaagagaaaggtgatactgtattaaattcatcagctggtcttgaaggtcaa
tcgaaggagatctcagttagtttataccgccaaaacaatgttgggggaagtgtcgcaaaa
gttgttgattcatcaaacactttaaatgatgcagtgaataatacaagaacaccaacgcaa
aaggcgatgaggactctgttcgtgaatggtgttcctcacgagagcaacagaagggacctc
attcttgcccattttcagaaatttgggaaagttattgacattcacatcccagcaaatagt
aaccgagcatttgttcaattctcaaaacgtgaagaggccgagtctgctctcagggcgcct
gatgctgtaatgggtaaccgctttatcaaactttggtgggcaaatagagatagtatacct
gataatggcctgtccactgggaatggtgcttttatgaagggtcgtggtgtgggtgcttct
ggaggacagaaccagattcctattgctgcagcatcgaaaagcaaccatgtatctcttact
gcgaaagggcctgccttccaccctggtggagctccatcatcctctcaacagcctaagcct
gtgggggtcactactggtcccaaggttacgccgcttcagcagaaaaaagcagacactctt
gagcagttgaaagagacacttcggaaaaagcaggaaatgcttgatcaaaagcgtaacgag
ttatgcaaaaagttggcgactcttcaaaaacaagaaacgggtgttaaggacgaggaagca
gatgagccagatgctaagcgcgttaaggtggacacagcctctaactccggtgctgcaatc
ccatcaccaaaaacagagtcatcgactgagaagaaagggcctatcaagaaaccactttct
attgctagaccaagcacagaaacgccatcgcccgattcaaaaaacttaaagcaaagaccg
tattcgtataccacaagtttgaacactcctatggtaaataggtataagttggacaaccgc
acgactaccatcaaagttgtccctcctttaccaacggggttagccgatgttgctgtcttg
aaggaacatttctcttcttatggcgaggtctcaaaagtggaactcgaagacaatgcctcg
actgatagtggcaaggatcaggatgaaacacataacaaaacccttgcagcctgtgtgaca
tttgtgaaacgcagcgcagctgagaaagcgtttgctaatgcaaggtcttggcaagaacac
acgctgcagctcgtgtgggtaacacgtcaaatcaagaaagagaataaaagtagcagtgac
aagaataatccctctgtttctagtgaccaccttagcagcaaaaacaagtccgctgcttct
gtttctaatgacccgaaaccagaagatgaagtcaaagcctcttctacagaagaaccaaag
agcacaaatgtctctggagacgacaatacattgaatgaacaagcggccaaagaaagcgac
aatgacaacaataaaagtaatagcgagttcatcgagggagctgaaaaagttgcagcgcca
gaaagtaatgaagaacagatgaatggttaa
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