Brassica napus (rape): 106387387
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Entry
106387387 CDS
T04128
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
KO
K10140
DNA damage-binding protein 2
Organism
bna
Brassica napus (rape)
Pathway
bna03420
Nucleotide excision repair
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106387387
09124 Replication and repair
03420 Nucleotide excision repair
106387387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106387387
03400 DNA repair and recombination proteins [BR:
bna03400
]
106387387
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
106387387
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
106387387
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
106387387
NCBI-ProteinID:
XP_013682691
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Position
A2:4267455..4270542
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AA seq
553 aa
AA seq
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MGLTRNRRKREPEIVIARDTDSESSASEEEEEDDYPLSESEKEDEAVKIELEKSKAKGKA
PITVKLKKVCKVCKQPGHEAGFKGATYIDCPMKPCFLCKMPGHTTMSCSHRVVTDHGILP
TSHRNTKNPIDFVFMRQLQPRIPPIKPPYVIPDQVHCAVIRYHSRRVTCLEFHPTRNNIL
LSGDKKGQIGVWDFAKVYEKSVYGDIHSVQVNNMRFSPTNDDMVYSASSDGKVGYTDLET
GTSSTLLNLNPNGWQGPTTWNMLYGLDINSDKGLVLAADNFGLLHMIDHRSNNVTGEPIL
IHKKGSKVVGLDCNPVHPELLLSCGNDHFARIWDMRKLQPGESLNDLAHKRVVNSAYFSP
SSGTKILTTSQDNRIRVWDSIFGDLDSPSREIVHSHDFNRHLTPFKAEWDPKDASESLIV
VGRYISENYNGAALHPIDFIDSSNGQLVAEVMDPNITTITPVNKLHPRDDVLASGSSRSL
FIWRPEEKREMVEEKEKEKEKKIVICYGDSNKKGKKQKRGSDDEDEDDDMFSSKGKNIKA
KAKTTKSTRKTKA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggtttaacaaggaacagaagaaaaagggaaccagaaatcgtcatcgctagagacaca
gattccgagtcaagtgcgtctgaagaggaagaagaagatgattatcctttgtcagagtct
gagaaagaagatgaagcggtcaaaatcgaattggagaagagtaaagcaaaagggaaagca
cccattaccgttaagctcaagaaagtttgcaaagtctgtaaacagcctggtcatgaagct
gggtttaaaggagcaacatatatcgattgtcctatgaaaccttgcttcttatgcaaaatg
cctggccacaccacaatgtcatgttcacatagagtggttactgaccatgggatactccca
acttctcataggaatacaaagaaccctatagactttgtgttcatgcgtcaactccagccg
agaattccaccgattaaaccaccgtatgtgatcccggatcaagtgcattgtgcagttatt
cgataccatagcagacgtgttacatgtttggagttccatccaacaagaaacaacattctt
ctctctggagataagaaagggcaaattggagtctgggattttgctaaagtgtatgagaag
agcgtgtacggagacatacactctgtacaagttaataatatgcggtttagtcccacaaat
gatgacatggtttattctgcatcctctgatggaaaagttggttatactgacctggaaact
ggaacttcatcaactttgctgaatctcaaccccaatggatggcagggcccaactacttgg
aacatgctgtacggtttggatataaactcggataaaggtttggtgctagctgctgataat
ttcggcttgcttcacatgatcgaccaccggtcaaataacgtaacgggagagcccattttg
atacacaagaaaggcagcaaagttgttggccttgactgcaacccggttcaccctgagctt
ctccttagctgtggaaacgatcattttgcaagaatctgggacatgcgtaaactacaacct
ggagaatcccttaatgatcttgcgcacaaacgagtagtcaactctgcttatttctctcca
tcgtcaggaacaaagattctcacaacctctcaggacaaccgtattcgagtgtgggactct
atctttggggacttggattcgccaagccgagagattgttcatagccatgatttcaatagg
catttgacaccgttcaaagctgaatgggatcctaaggatgcctcggagtcactcattgtg
gtcggtcgttacataagtgaaaactacaacggagctgctctccacccaatagacttcatt
gattcaagcaatggacagttggttgcagaggtcatggatccgaacattacgactattact
ccagtcaacaagttgcatccgcgcgacgatgttttagcctctggaagctcaaggtcgctg
ttcatttggcggccagaggagaagagagagatggttgaggagaaggagaaggagaaggag
aagaagattgttatatgttatggtgacagcaataagaaaggcaaaaagcaaaagcgtggc
agcgatgatgaagatgaggatgacgatatgtttagctctaaaggcaaaaacattaaggct
aaagccaaaacaaccaaatctactcgcaagacaaaggcttaa
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