Brassica napus (rape): 106388626
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Entry
106388626 CDS
T04128
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106388626
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106388626
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106388626
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
106388626
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class II (A)
106388626
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106388626
Prokaryotic type
Other AARSs
106388626
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
YlbD_coat
tRNA_anti_2
Motif
Other DBs
NCBI-GeneID:
106388626
NCBI-ProteinID:
XP_048624160
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All DBs
Position
C9:62433206..62438441
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AA seq
577 aa
AA seq
DB search
MEDHSDLPSRSMDVAATALPLDDEEEYVYEDALSECSEVQDAEQCLQKYYENRLKDLDNG
DQDSYPHKFAVSISVSEFIAKYKSLFNGDHVEDDQVSVAGRIMSKRSSSSKLSFYDLNDS
CLKVQVMADLRKSELDKDEFAKLHAFAKRGDIVGVTGSPGKTKRGELSIFPRSFTVLSPC
LHMLPSPANNRKQEIWSPGHLRHPERYLLKDQETRFRQRYLDLMMNNHEIPQIFKTVDNI
NKYIRRFLSLLDFVEVSAPMLHAIPGGAAARPFVTHHNDLDMKLYMRISPELHLKKLVIG
GMDRVFEIGKQFRNESIDMTHNPEFTTCEFYMAYADYNDLMKMTEDLLSGMVKELTGGYR
VKYHAKGYDKDPIVIDFTPPYRRIDMIGELEKVANLSIPKDLASEEANKYLIDACGRFGV
KCAAPMTTARLLDKLVGHFLEGTCVNPTFIMNHPEIMSPLAKSHRSIKGLTERFELFINQ
HELCNAYTELNDSVVQRQRFADQLKDRQSGDDEAMAMDESFCTALEYGLPPTGGWGIGID
RLAMLLTDSHNIKEVITFPLMKPQAQDAAPEAEDDKL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccactctgatctgccttcgagatccatggacgttgcagcaactgctctaccc
ctcgacgacgaagaagagtatgtgtatgaggatgcgctgagcgagtgcagtgaagtgcaa
gacgccgaacaatgtttgcagaaatactatgaaaacagattgaaggatcttgataacgga
gatcaggacagttacccacacaagtttgctgtgtcgatttctgtctctgagttcattgcc
aagtataaaagtctattcaacggcgaccatgttgaagacgaccaagtttctgtagccgga
cggataatgagcaagagatcttcatcttccaagctttcattctatgatttgaatgatagt
tgtttaaaggtccaagtcatggctgatttaaggaagtctgaactagacaaagatgagttt
gccaagctccatgcctttgctaagcgtggtgatatcgtcggtgtcactggttctccagga
aaaactaagagaggagagttgagtatcttcccacgatcgtttaccgtgctgtctccttgc
ctccacatgttgccgagtcctgctaacaataggaagcaagaaatttggtctccaggacac
ctaagacatccagaaagatatcttcttaaagatcaggaaactcgttttcgccagcggtat
cttgatctgatgatgaacaatcatgagattcctcagatattcaagaccgttgataacatc
aacaaatacattagaagattcctctcccttcttgatttcgtagaggtttcggctccaatg
ctccacgcgatacccggtggagcagctgcgcgtcccttcgtgacgcaccacaacgacctc
gacatgaagctctacatgcgtatctcgcccgagctccatctcaagaagcttgttatcggc
ggtatggaccgtgttttcgagattgggaagcagttcaggaacgagagtatcgacatgacg
cacaatcccgagttcaccacctgcgagttctacatggcttacgctgactacaatgacttg
atgaagatgaccgaagatttgctgagtgggatggtcaaggagctaacgggtggttacaga
gtcaagtaccatgctaagggatatgataaggatccgatagtaatcgacttcactcctcca
tacaggaggattgatatgataggagagttggagaaggttgctaatctcagcataccaaag
gatttggctagtgaggaagctaacaagtatctcattgatgcatgcgggaggtttggtgtc
aagtgcgcagctcctatgacaactgctcgtttgttggacaaacttgttggacactttctg
gaagggacatgtgttaatcccactttcataatgaaccacccggagataatgagtcctttg
gcaaagtcgcacagatccatcaagggcttgactgaacggtttgagttgttcattaaccaa
cacgaactttgcaatgcatacacggagttgaatgactctgtggtacagcgtcagcgtttt
gctgaccagctcaaggatcgacaaagtggagacgatgaagcgatggctatggatgagagc
ttttgcactgctctggagtatggattgcctcctacaggtgggtggggaattggaatagac
cggctcgctatgctgcttaccgactcccacaacattaaggaagttattaccttcccacta
atgaagcctcaggctcaggatgcagctccagaagcggaggatgacaagctttaa
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