Brassica napus (rape): 106402980
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Entry
106402980 CDS
T04128
Name
(RefSeq) aconitate hydratase 3, mitochondrial-like
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
bna
Brassica napus (rape)
Pathway
bna00020
Citrate cycle (TCA cycle)
bna00630
Glyoxylate and dicarboxylate metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
bna01210
2-Oxocarboxylic acid metabolism
bna01230
Biosynthesis of amino acids
Module
bna_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bna_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
bna_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
106402980
00630 Glyoxylate and dicarboxylate metabolism
106402980
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
106402980
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
PTS_IIB
HypD
Motif
Other DBs
NCBI-GeneID:
106402980
NCBI-ProteinID:
XP_013699256
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Position
C7:complement(13056053..13061598)
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AA seq
986 aa
AA seq
DB search
MYKNASSSILRAASSRSLRSSLTSSSASAAASPCSLVGQRSFATYSPAFRSLARWSHCLH
SRPSPFRLSSQIRTASPVLDRLEKNFSSMASEHPFKGILTTLPKPGGGEFGKFYSLPALN
DSRIDKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWEKTAPKQVEIPFKPARVLLQDF
TGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQ
RNKERFAFLKWGSTAFHNMLVVPPGSGIVHQVNLEYLGRVVFNTQGVLYPDSVVGTDSHT
TMIDGLGVAGWGVGGIEAEATMLGQPMSMVLPGVVGFKLSGKMRNGVTATDLVLTVTQIL
RKHGVVGKFVEFYGDGMSGLSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDE
TVAMIEAYLRANNMFVDYSEPQQERAYSSYLELNLDNVEPCISGPKRPHDRVPLKEMKAD
WNSCLDNKVGFKGFAIPKKAQEKVANFSFNGKPAEIKHGSVVIAAITSCTNTSNPSVMLG
AGLVAKKACDLGLQVKPWIKTSLAPGSGVVTKYLLKSGLQEYLNQQGFNIVGYGCTTCIG
NSGEINESVGVAITENDIVVAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVNI
DFETEPIGTGKNGKEVFLRDIWPTTEEIAEVVQSSVLPDMFRATYESITKGNPMWNELSV
PENTLYSWDPKSTYIHEPPYFKDMTMDPPGPHSVKDAYCLLNFGDSITTDHISPAGNIQK
DSPAAKYLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLMNGEVGPKTVHIPSG
EKLSVFDAAMRYKSSGEDTIILAGAEYGSGSSRDWAAKGPMLQGVKAVIAKSFERIHRSN
LVGMGIIPLCFKSGEDADSLGLTGHERYTIHLPTDISEIRPGQDVTVTTDNGKSFTCTVR
FDTEVELAYFNHGGILPYVIRNLSKQ
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaacgcatcttcctccatccttcgagctgcttcctctcgctccttacgatcc
tctttgacttcttcctccgcctctgccgccgcatctccttgttctcttgtcggtcagaga
tcttttgccacttactcccccgctttccgttcacttgctcgctggagccattgccttcac
tccagaccttctccctttcgccttagctctcagatcagaactgcttcccccgttttagac
cgactcgagaagaacttctcatccatggcgtcagagcatccatttaagggtatcctcacg
actcttcctaagcctggtggtggcgaattcggaaagttctacagcttgcctgctctcaac
gattcaaggattgataaactgccttactctatcaggattcttcttgaatctgcgattcgt
aattgtgataacttccaagtgaccaaggaagatgttgagaagattatcgactgggaaaag
actgctcctaaacaagtcgagattccgttcaagccagctcgtgttcttctccaggacttt
actggagtaccagctgttgttgaccttgcttgtatgcgtgatgctatgaacaaactgggc
agtgattccaacaaaatcaaccccttggttccggtggatcttgtgattgaccattctgtt
caagttgacgttgctcgttctgagaatgcagtgcaagcaaacatggagcttgaattccag
agaaacaaggagaggtttgctttccttaaatggggttctactgccttccacaacatgctt
gttgtgcctcctggctctggtattgtgcatcaggttaatttggaatatcttggaagagtt
gttttcaacacccaaggcgttctctacccagacagcgtggttggaactgattcacatact
actatgatcgatggcttgggagttgctggatggggagttggaggcattgaagctgaggcg
acaatgcttggccagcccatgagtatggtattgcctggtgttgttggatttaaactgtcc
gggaaaatgcgaaatggtgttacagctactgatttggttctaacagtaactcaaatactg
aggaagcatggcgttgttggaaagtttgttgagttttatggtgatggtatgagtgggctg
tccctagctgacagggctacaattgccaatatgtctcctgagtatggtgcaaccatgggc
ttcttccctgtggatcatgtgactctacagtatctcaaattgactggaagaagtgatgag
accgtggccatgattgaagcatatcttcgggcaaacaatatgtttgttgattacagtgag
cctcagcaagagcgggcttactcgtcatatctagaactgaacctggacaatgttgaacct
tgcatttctggaccaaagcggccacatgatcgtgttcctttgaaggaaatgaaagctgac
tggaattcatgtctcgacaataaagttggattcaagggttttgcaatccctaaaaaggca
caagaaaaagtggcgaacttttctttcaacggaaaaccagcagagataaaacatggaagt
gtggtgattgctgcgatcacaagctgtactaatacatcaaaccccagtgtcatgcttggt
gctggtcttgttgccaaaaaggcttgtgaccttggcctacaggttaagccttggataaag
acaagtcttgcgccaggctcaggagttgttacaaaatacttattaaagagtggactgcaa
gaatatctgaatcagcagggtttcaatattgtcggctatggctgcactacatgcattggt
aactctggagaaattaatgaatcagtgggagttgctatcacagaaaatgacattgtggtg
gctgctgtgctttccggaaacaggaactttgagggtcgtgttcatccactaacaagagcc
aactaccttgcatctcctcctttggttgttgcgtacgctcttgctggaacggttaacatt
gactttgaaacggagcccattggcactggaaagaatggcaaggaggtcttcttaagggac
atctggccaaccacggaagaaattgctgaggtggttcaatcgagtgttttgccagacatg
ttccgagcaacatatgagtcgatcaccaagggtaacccgatgtggaatgagctgtctgtt
cctgaaaataccctctattcatgggatcctaagtcaacttacattcacgagccaccatac
tttaaggacatgaccatggatcctccaggtccacacagtgtgaaagacgcttactgtctg
ctcaactttggtgacagtatcaccactgatcacatctcgccagctgggaacatccagaag
gacagtcccgctgcaaagtatctcatggagcgtggcgttgatcgcaaggacttcaactca
tatggaagtcgccgtggaaatgatgaaataatggccagaggcacatttgctaacatccgt
atcgttaataagctcatgaatggggaagttggccctaagaccgttcacattccttctgga
gagaagctctcagttttcgacgcagccatgaggtataagtcatctggtgaagacacaatt
attctagctggagccgagtatggaagtggtagctcacgtgattgggctgctaagggacct
atgctacagggcgttaaagcggtgatagcaaagagttttgagaggattcaccgaagcaac
ttggtgggaatgggaatcattccgttgtgttttaagtccggtgaagatgcagactcactg
ggattgacgggtcacgaacgctacacgatccatctcccgacagatatatcagagataaga
cctggacaagatgttaccgttactaccgacaacggaaagtctttcacttgcacagtccgc
tttgacactgaggtggaactggcatacttcaaccatggaggcattcttccatatgtcatc
agaaacttgagcaagcagtag
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