Brassica napus (rape): 106416609
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Entry
106416609 CDS
T04128
Name
(RefSeq) transcription factor mef2A isoform X4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106416609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106416609
03019 Messenger RNA biogenesis [BR:
bna03019
]
106416609
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
106416609
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106416609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
106416609
NCBI-ProteinID:
XP_013712986
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All DBs
Position
C9:complement(55830571..55833483)
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AA seq
461 aa
AA seq
DB search
MRPHYNRPQRPQQQQQQNNGYPNQQHNGFHQNPGMMMNPQMMMMGNPMMMGNPMNNMQNM
PPPIHPQFFNNMPQQQQQPLHQFGFPNPINQLIPNLLGSLQFAAANNNLMGGGHSMQPNY
FQPSGFTSQAQLSSYNPPPYSPPTPQQHQNHQLGPPGFSETPRPQVQSSVGNVNNTNNFN
SKGNDFRNNTKQQNFRGPGQGSQSYQGNNANKKIGFNKNNKGKGKNKKMAPRLFGSDAGN
AEETKRPYIPNYPPKEVQQWRQARRKNFPTKLNVEKKVKKNDSNGSLDDEAKLRRQQLRE
VLAKQRELGVEVAEVPSHYLSNPVEEVSGDNSGQFQNKDGKKGRFRHNKRKYGEKNKFNK
KRKFQDQDSSQESSVTTRKPTLLEKLLSADIKRDKIQLLQVIRFMVINSYFKESPEEPLK
FPLVMVEETGCEHAEEVLSDDDNDDDDVDENGDDSCDEVSD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctcactacaaccgcccgcagcgaccgcaacaacaacaacagcagaacaatggt
taccctaatcaacaacataatgggtttcatcagaacccagggatgatgatgaatccacag
atgatgatgatgggtaatccaatgatgatgggtaatccaatgaacaatatgcagaacatg
ccgccgccaatacatcctcagttttttaacaatatgcctcaacaacaacaacaaccgctt
caccaatttggtttccccaaccctatcaaccagctgattccaaacctgttgggtagtctt
cagtttgctgctgctaataacaatcttatgggtggtggtcactcaatgcagcccaattat
ttccagccttctggtttcacttctcaggcgcagctaagttcctataacccccctccatat
tctcctcctacacctcaacaacatcagaatcaccaattggggcctccaggtttctcagag
acaccacgaccacaggtgcagtcttctgtaggaaacgtcaacaacaccaacaatttcaat
tcgaaagggaatgattttcgaaataatacaaaacaacaaaatttcagaggccctggtcaa
ggatctcagtcgtatcaaggaaacaatgcaaataaaaagattgggttcaacaagaataat
aagggaaaagggaagaataagaagatggcacctaggctctttggatctgatgctggtaac
gctgaagaaacgaaaagaccgtacattccgaactatcctccaaaagaagttcagcaatgg
cgtcaagctcggcgtaagaattttccaacgaaactcaacgttgaaaagaaagtaaagaaa
aatgattcaaacggcagccttgacgatgaagcaaaactgcgtcgtcagcaacttcgggaa
gtgttagcaaagcagcgtgagttaggtgttgaagtagcagaagttccttcacattattta
tccaatccagttgaagaagttagtggagacaacagtggacagttccaaaacaaggatggc
aaaaagggaagatttagacacaataagagaaaatatggtgagaaaaacaagttcaataaa
aaacgtaagttccaagaccaagattcatctcaagaatcttccgtgacgacgaggaaacct
acattgcttgagaagctcctaagcgctgacataaagagagacaagatccagttgttacag
gtcattcgcttcatggtaatcaattcatacttcaaggagtcgccagaggaacctctgaag
tttcctttggttatggtagaagaaactggttgtgaacatgcggaggaagttttatccgat
gacgataacgatgatgatgatgtggatgagaatggtgatgactcatgtgatgaagtttct
gattga
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