Brenneria nigrifluens: EH206_04450
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Entry
EH206_04450 CDS
T06070
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
bng
Brenneria nigrifluens
Brite
KEGG Orthology (KO) [BR:
bng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bng03016
]
EH206_04450 (truD)
Enzymes [BR:
bng01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EH206_04450 (truD)
Transfer RNA biogenesis [BR:
bng03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EH206_04450 (truD)
Prokaryotic type
EH206_04450 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QCR06822
LinkDB
All DBs
Position
979887..980933
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AA seq
348 aa
AA seq
DB search
MTNGEQLTWLHGKPQASGALKSTAEDFTVIEDLGFQPDGEGEHILTRVRKRGCNTQFVAE
ALAKFARIPARAVSYAGLKDRHAVTEQWFCLHIPGKETPDFSRFTLEGCEVLEFARHRRK
LRIGALQGNDFTLILRQISDRAAVDARLLRIAQDGVPNYFGSQRFGKNGNNLEQARLWAN
NDIRVKERAKRGFYLSASRSALFNQVASIRLAQQRAKTLLCGDALQLTGRGSWFVARPDE
LAALQARLDAGELQVTAPLPGDGALGTQDDALLFEQQSLVGQETLLSLLQRERVDPARRA
VLLYPRQMRWAWQDEVTVELKFWLPAGSFATSVVREIMNLQQEMNSID
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacggcgaacagcttacctggctgcatggcaaaccgcaggcgtcgggcgcgctg
aagtccacggcggaagatttcacggttattgaggatttgggttttcagccggacggcgaa
ggcgaacatatcctgacgcgtgtgcgcaagcgcggctgcaatacgcaattcgtcgccgaa
gcgctggcgaaatttgcccgcatccccgcgcgcgcggtgagctacgccggtctgaaagac
cgccatgccgtgacggagcaatggttttgcctgcatattcccggtaaagaaacccctgat
tttagccgttttacgctggaaggctgtgaggtgcttgaatttgcgcgtcatcgccgtaaa
ttacggattggcgcgctgcagggcaatgattttacgctgatattacgccagataagcgat
cgggcggcggtggatgcccgattactgcggattgcccaggacggggtgcctaactatttc
ggcagccagcgctttggcaagaacgggaataaccttgaacaggcccgtctctgggcaaac
aatgatattcgggttaaagagcgcgctaaacgcggcttttatctttccgccagccgcagc
gccctgtttaatcaggtcgccagtatccggctggcgcagcagcgggcgaaaaccctgttg
tgcggcgacgctttacaattgaccggccgcggcagctggttcgtcgccaggccggatgag
ctggcggcgttgcaggcgcgccttgatgcgggagagctgcaggtgaccgcgccgctgccg
ggcgatggcgcattaggcacgcaggatgacgcgctgctgttcgagcagcaaagccttgtc
gggcaggagacgctgctgtctttattgcagcgtgagcgggtcgatccggcccgtcgggcg
gtattgctgtatccgcggcagatgcgttgggcctggcaggatgaggtaacggtcgagctg
aaattctggttaccggcgggaagtttcgccaccagcgtggttcgtgaaataatgaacctg
cagcaagagatgaatagcatcgactga
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