Brettanomyces nanus: FOA43_000419
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Entry
FOA43_000419 CDS
T07002
Name
(RefSeq) uncharacterized protein
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
bnn
Brettanomyces nanus
Pathway
bnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FOA43_000419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bnn03400
]
FOA43_000419
DNA repair and recombination proteins [BR:
bnn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
FOA43_000419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
DUF5382_N
SAM_1
Motif
Other DBs
NCBI-GeneID:
62193820
NCBI-ProteinID:
XP_038776679
LinkDB
All DBs
Position
1:join(901666..901712,901767..903372)
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AA seq
550 aa
AA seq
DB search
MSDIEVINLDTSPHRDQPLENVIDVDEIDEFSDDHNGLIYSDPDQLCDLLGIKQSSKAVA
LLLSSSPPSSSQQLAPIRSRHAARVLSVESEKSETDCPSSQSGVITVESSSDQIIDFSVP
TSQYTSISCRRSRASNQHIQSYSDISSISNHSDSIVIEGLLDANESRPLTCTAATGSSPL
HQIHNYQPINTTLEPKTSHSCLSTPHYTDSELHIMLETAKRNDPKLLKQVNLVSHTKPEL
IAQMTVSFDVKLMDELKEINPNFTEFLKPMHFSAYQNPDNYPSIMFQRKVNSVYYKAKGA
FVPVKTHLENEKMIGLYVDSKKLPQMFKSHFLGDTIRSMRKTYADYRLVVFLSGYDSFLQ
GVRSRQNKEYINKVRQEMTQETESSDNSETTKRKRRRKNIKDMDGGEVKFTAEQVQAKLL
RYEVDHDIHLFPIKGIKDLVEWLKSLGYTLASKYIDNLERNLDFSNIGQIRSGKDARGSF
IEMLKQFKFMTTSSADKLVDETGIKSVTELMLMLQQGDKLVNSAGRPVVRSNVENVLRKV
LLSEDGEELI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatatagaagtcatcaacctagatacttcgccacatagagatcaaccattggaa
aacgttatagatgttgacgagatcgatgaattctctgacgaccataatggattgatctat
agtgatcccgatcagttatgtgatcttcttggaataaaacaatcgtcaaaagcagttgca
ttgctactttcgtcttctcctccatcttcttctcagcagttagcacccattcgttccaga
cacgctgcaagagtgttatcagtcgagagtgaaaagagtgaaactgattgtccaagtagt
cagtctggagtcataaccgtcgagtcatcgtcagatcaaattatcgattttagtgtgcca
acgtcccagtatacttcgatctcttgtcgtcggtccagagcatctaatcagcacatccaa
tcatacagtgacatcagctccatatcaaatcacagtgatagtatcgtgattgaaggtttg
ctggatgctaatgaatctcggcccttaacttgtactgcagcaactggaagctcgccttta
caccagattcacaactatcaacctatcaataccactctggagccaaagacatctcattca
tgtttgtctacaccgcattatacggactcggaacttcatataatgttggaaacagccaaa
cgtaatgatccaaagcttctaaaacaagttaaccttgtgtcacacactaagcccgagctt
atagctcagatgactgtgtcatttgatgtgaaacttatggacgaactcaaggagatcaat
cccaactttacagagtttttgaagccaatgcacttttccgcctaccagaatcctgataac
tatccaagtattatgtttcagcgcaaagttaactccgtttattataaagctaagggagcc
ttcgttcccgtgaagactcatttagaaaatgagaagatgattggattatacgtggactcc
aagaaacttccccagatgttcaaatctcattttttgggggataccattcgttccatgaga
aagacctatgcggattatcgtttggtggtgtttttatctggatatgactcgttcttacag
ggtgtgagatcccgtcaaaacaaagagtacatcaataaggtaaggcaagagatgacccaa
gagacggaatcctcagataattcagaaactaccaaacgtaagagaagaaggaagaacatc
aaggatatggatggtggtgaggtcaaatttaccgctgaacaggttcaagcgaaattacta
cgctacgaagttgatcatgatatccatttatttcctataaagggaattaaagatcttgtg
gaatggctcaagagcctcggttacacattggccagtaaatatatagataacttggagaga
aatttggatttctcaaacataggtcagattagatcgggtaaagatgcccggggctccttc
atagagatgttgaagcaattcaaatttatgaccacgagttctgcagacaagcttgttgat
gaaacaggtatcaaatctgtgacggaattgatgcttatgttgcaacaaggtgataagctt
gtcaattctgcaggccgaccagtggtcagaagtaatgtggagaacgtgctacgcaaagtg
ctcttatccgaagatggtgaagaactcatatag
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