KEGG   Brettanomyces nanus: FOA43_002964
Entry
FOA43_002964      CDS       T07002                                 
Name
(RefSeq) uncharacterized protein
  KO
K04802  proliferating cell nuclear antigen
Organism
bnn  Brettanomyces nanus
Pathway
bnn03030  DNA replication
bnn03410  Base excision repair
bnn03420  Nucleotide excision repair
bnn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bnn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FOA43_002964
   03410 Base excision repair
    FOA43_002964
   03420 Nucleotide excision repair
    FOA43_002964
   03430 Mismatch repair
    FOA43_002964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bnn03032]
    FOA43_002964
   03400 DNA repair and recombination proteins [BR:bnn03400]
    FOA43_002964
DNA replication proteins [BR:bnn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    FOA43_002964
DNA repair and recombination proteins [BR:bnn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     FOA43_002964
   MMR (mismatch excision repair)
    Other MMR factors
     FOA43_002964
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    FOA43_002964
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1 IntS11_C DNA_pol3_beta_3
Other DBs
NCBI-GeneID: 62196365
NCBI-ProteinID: XP_038779172
LinkDB
Position
3:join(672116..672157,672212..672949)
AA seq 259 aa
MLEGKFEQASTMKKVIEAIKDSVKLCNFNCSQSDGITVQAIDDSRVLLIALKLDPSCFQE
FRCDKDSVLGLDLESLGVILKQGSSNDIMTLIAEDNPDVLLLVFEDHEKDRISEFSLKLI
DIDSDVLTIDDMDHDCSISMPSADFAKVVRDMRTLSESLQILVTKDSIKFKADGSIGTGS
VILKAHTDLDDTKKSVRIDMNKPVNLSFGAKYLNDIVKASSLADTVNIKLTDKAPALIEY
KLQGGYLRYYLAPKFEDEE
NT seq 780 nt   +upstreamnt  +downstreamnt
atgttagaaggaaaattcgagcaagcctcgaccatgaaaaaggtcatcgaagccattaaa
gatagcgtcaaattatgtaatttcaattgctctcaatcggatggtattacagttcaagcc
attgacgattccagagtcctacttattgcactgaaattggatcctagctgcttccaggag
ttcagatgcgacaaagattcggttcttggactcgatttagagtctctaggtgtgattcta
aagcagggtagctctaatgatatcatgactttgattgccgaggacaatccagacgttctt
ttgcttgtttttgaagaccatgaaaaggaccggatttcggagttttccttaaagttgatc
gacattgactcggatgttcttactatcgatgatatggatcacgattgttccatttctatg
ccttctgcagactttgcaaaggttgttagagacatgaggactttgagtgagtccttgcag
attttggttactaaggattctatcaaatttaaagctgatggtagtattggtactggttcg
gtgattttgaaagctcatactgacttggatgataccaagaagtcggttagaatcgatatg
aataagcctgtcaatttatcgtttggagcaaagtatctgaacgatattgttaaggcttct
tcgttggctgacactgttaatatcaaacttaccgacaaggctccggctttgattgagtat
aagcttcagggaggatatttgaggtattatttggcacctaagtttgaggatgaggagtag

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