Bacillus nitratireducens: GSN03_22380
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Entry
GSN03_22380 CDS
T07605
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bnt
Bacillus nitratireducens
Brite
KEGG Orthology (KO) [BR:
bnt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bnt03016
]
GSN03_22380 (thpR)
Enzymes [BR:
bnt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GSN03_22380 (thpR)
Transfer RNA biogenesis [BR:
bnt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GSN03_22380 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QUG86070
LinkDB
All DBs
Position
complement(4390134..4390679)
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AA seq
181 aa
AA seq
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MVPHYFVAVTLPRHIKEILSNYKVEMKDELPFRSWVHEEDYHITLSFLGSATEEQLEGIK
NGLQTLTEIKELTFTLQEFSTFGMEDKPRIFWAKISENNNLVQLQKQVHIICEENGFSLD
TRPYHPHITVARKWVGEKVFDLANVKGLPVTSFQADTITLYESHVKETPKYRPVAEIKLQ
K
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgcattattttgtcgcagtaactttaccacgtcatataaaagaaattctttct
aattataaagtggaaatgaaggatgaattaccatttcgctcgtgggtacatgaagaagac
tatcatattaccctttcatttttaggaagtgcgacagaggaacaattagaaggaataaag
aatggattacaaacacttacagaaatcaaagaactaactttcacgttacaagaattttca
acgtttggcatggaagacaagccgcgtattttttgggcgaagataagtgagaataataat
ttggttcagttgcaaaaacaagtgcatataatttgtgaagaaaatggcttctctctagac
acgcgcccgtatcatccgcatattactgttgcgcgtaaatgggtaggagaaaaagtattt
gatctggcaaatgtaaaaggcttacctgtaacatcatttcaagcagatacgattactttg
tatgaatctcacgtgaaggaaacgccaaagtatagaccggttgctgaaataaaattacaa
aaatag
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