Brassica oleracea (wild cabbage): 106296408
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Entry
106296408 CDS
T04124
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing] isoform X1
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106296408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
boe03400
]
106296408
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
106296408
DNA repair and recombination proteins [BR:
boe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106296408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
106296408
NCBI-ProteinID:
XP_013587995
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All DBs
Position
C6:39498913..39501280
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AA seq
350 aa
AA seq
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MQLGFLGIGAYNYNLLELGLRAFGKLQFFLVAIEKSETFRTMSASDREFRSVLVPAGNKL
QQKPLSKPVKKTASKSKDLTFTASPAKKSSSPLSPSILRRNGVSMNASYSSEASSSCESS
PLSMASTSSGKRGLRRTGSNSSSTLRRNMTEETGDCFSDGRRRCAWITPKSDLCYIAFHD
EEWGVPVHDDKKLFELLSLSGALAELSWKDILSKRQSFREVFMDFDPIAISELTNKKITS
PDSLLSEQKLRSILENANQVRKIIVEFGSFGKYIWNFVNQKPTQSQFRYSRQVPVKTSKA
ELISKDLVRRGFRSVSPTVIYSFMQTAGLTNDHLTSCFRHQECISKDETS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcagctagggtttctcggaatcggtgcgtacaattacaatctcttggaattgggttta
agggcttttgggaaattgcaattcttcttagtcgcgatcgaaaagtcggagacttttagg
acaatgtcggcctccgaccgagagttccgttcagttctcgttcccgccggtaacaagctg
cagcagaaaccgttgtcaaagccggtgaagaagaccgctagtaaatcgaaagacctaacc
tttacggcgtctccggcgaagaagagttcgtctcctctgagcccttcgattctgaggagg
aacggtgtctcaatgaacgcatcgtactcgtcggaggcgtcgtcttcgtgcgagtcgtcg
ccgttgagtatggcgtctacttctagcgggaagaggggtttgcggcgtaccgggtcgaac
tcttcaagcacactgagaaggaatatgacggaggagacaggtgattgcttctctgatggt
cgtagaagatgcgcttggatcactcccaaatctgacctatgttacattgctttccacgat
gaagagtggggagttcctgtccatgatgacaagaaacttttcgagctattaagcctctct
ggtgctcttgcggaactgtcctggaaagacattctttccaaaagacaatcattcagggaa
gtattcatggactttgatccaattgccatatctgaactaactaacaaaaagataacatcc
cctgactcattactatcagagcaaaagcttcgctcaatcctcgagaatgcaaaccaagtt
cgcaagataatagttgagtttggatcatttggcaagtacatttggaacttcgttaaccag
aagcctactcagagccagttccggtactctcgccaagtccctgtgaagacttccaaagct
gagttgataagcaaagaccttgtccgcagaggcttccgcagtgttagtcctacggttatc
tactccttcatgcaaacagccggtctcactaacgaccatctcactagctgcttcagacac
caagaatgcatttccaaggacgagaccagttag
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