KEGG   Brassica oleracea (wild cabbage): 106312031
Entry
106312031         CDS       T04124                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 5
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:boe03041]
    106312031
Spliceosome [BR:boe03041]
 Complex A
  U2 snRNP components
   U2 related factors
    106312031
 Complex B
    106312031
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 RRM_1 zf-CCCH_4
Other DBs
NCBI-GeneID: 106312031
NCBI-ProteinID: XP_013604855
LinkDB
Position
C8:complement(19326702..19330548)
AA seq 739 aa
MEPRNEKEEGERLEEAMGGFEESKEKSAEMSRKEKRKAMKKMKRKQVRKEIASKEREEAE
AKLNDPAEQEKLKAIEEEEERKREKELREFEESERAWREAMEIKRKKEEEEERRWKELEE
LRKLEASGDDECGEDDDGEYEYIEEGPPEIIFQGNEIILRKNKVKVPKRSVAQVEGNEIA
DRPTSNPLPPGTEAFPKNHNVSSAQQILDSVAQEVPNFGTEQDKAHCPFHLKTGACRFGP
RCSRVHFYPDKSCTILMKNMYNGPGIAWEQDEGLEYTDEEAEQCYEEFYEDVHTEFLKYG
ELINFKVCRNGSFHLKGNVYVHYRSLESAMLAYQSINGRYFAGKQVNCEFVNISRWKVAI
CGEFMKSRLKTCSRGSACNFIHCFRNPGGDYEWADFDKPPPRFWIRKMAALFGYSDEDLK
HMEREYSGSLSEFRSDQPSDSQRQASRRSRSRDHDHVNVGSKPSYRSRKNHGDTRDSSRG
HKLSRHEENCHGSPSSTRDGSLEREIYKEQRHAKETSRHESKWSEHSPTHRGMRKRIHES
YSDDDSGDDDGKGETDHKRKSSRRYGRRESNSEVQERLDDEEDTRCHWSSSDRRSRKEDH
REGSLGDQEESHAVGEKSQRERSSSRHSHEGDSSGSRHRPHKRSDLRDKDGNERKRSVET
SPRDKDRDKSKQRRRYKTGDPDYDRSRNGKRENVSGSSSDEKREERHKERSGSSHRKRRR
SSHEQTPKEPEEIERWRPI
NT seq 2220 nt   +upstreamnt  +downstreamnt
atggagccgcggaacgaaaaggaagaaggagagcgactcgaagaagcgatgggagggttt
gaagagagtaaagagaaatcggcggagatgagccgtaaggagaaacgaaaagcgatgaag
aagatgaagaggaagcaggtgaggaaggagatagcgtcgaaagagagagaggaggcggaa
gccaaattaaacgatccggcggagcaggagaagctgaaggcgattgaggaagaggaggag
cggaagagagagaaggagctgagagagttcgaggagagtgagagagcttggagagaggct
atggagattaagaggaagaaagaggaagaggaagaaaggcgttggaaggagttagaggag
ttgagaaagcttgaggctagtggggatgatgaatgtggtgaggatgatgatggtgaatat
gaatatattgaagaagggcctccagagattatattccagggtaatgagatcattctgagg
aagaacaaagtgaaggttccaaagagatctgtagctcaggtggaaggaaatgagattgct
gacaggcctacatcgaaccctctacctccgggaacagaagcttttccaaagaatcataat
gttagctctgctcagcagattctggatagtgttgcacaggaagtacccaacttcggaact
gagcaggataaagctcattgtcctttccatttaaagactggagcttgtcggtttggcccg
cgttgcagcagggttcatttctacccggataaatcgtgcactatacttatgaagaacatg
tataacggtcctggcattgcttgggagcaggatgaggggcttgagtatacagatgaggaa
gctgaacaatgttacgaagaattttatgaagatgttcatacggagtttctgaagtatgga
gaacttattaatttcaaggtatgtagaaatggctcattccacttgaagggaaatgtgtat
gtacactacagatcattggaatcagctatgcttgcctaccaatccatcaatggtcgatat
tttgctggtaaacaggtgaactgcgaatttgtaaacatctcaagatggaaagtcgccata
tgcggggagttcatgaagtcgaggcttaaaacttgctctcgtggatctgcttgcaacttc
atccattgtttccgaaaccctggtggagactatgaatgggctgactttgacaaaccacct
ccgagattctggattcgcaaaatggccgctttatttggttattcagatgaagacttgaag
cacatggagcgtgaatattcagggtcgttgagtgagtttagatcagaccaaccatcagat
tcacagaggcaagcttcaagaagatctagatcgagggaccatgatcatgtgaacgttgga
tctaaaccttcttataggagccgtaagaatcatggtgatactcgggacagctctcgtgga
cacaaacttagtaggcatgaagagaactgtcatggaagtcctagcagtactagagacggt
agtttagagagggagatttataaagagcaacggcatgctaaagagacatcgcgtcatgaa
agcaaatggtctgaacactctcctacacatcgggggatgaggaaaagaatccacgagagc
tattccgatgatgattcaggagatgacgacggcaagggagagacggatcacaaacggaaa
agctcaaggcgttatggcagaagagaatcaaattcagaagttcaagaacggctggacgat
gaagaggacacgaggtgccattggtctagttctgacaggaggtcaaggaaagaagatcac
agggaaggatcattaggtgatcaggaggagagtcatgcagttggtgaaaagtcgcagagg
gaaagaagcagctcaagacattcgcacgagggagactcgagtggaagtagacatcgtccg
cataaaagatcagaccttagagacaaggacggaaatgagaggaaaagaagtgtggagacc
agtccacgagataaagatagggacaagagcaagcagagacgtagatacaagaccggtgat
cctgattatgatcgaagcaggaatggaaagagagagaatgtaagtggttcatcaagtgat
gagaagagagaagaaagacacaaagagagatctggtagtagccataggaaacgaagaagg
tcatcacacgagcagactccaaaggaaccagaggagattgagcgttggagaccaatatga

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