KEGG   Brassica oleracea (wild cabbage): 106312888
Entry
106312888         CDS       T04124                                 
Name
(RefSeq) lysine-specific demethylase JMJ25-like
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:boe03036]
    106312888
Enzymes [BR:boe01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     106312888
Chromosome and associated proteins [BR:boe03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    106312888
SSDB
Motif
Pfam: JmjC zf-4CXXC_R1 Cupin_2
Other DBs
NCBI-GeneID: 106312888
NCBI-ProteinID: XP_013606024
UniProt: A0A0D3DZS3
LinkDB
Position
C9:complement(439298..446019)
AA seq 886 aa
MEERKGKRIRSEEDPPRSSDKRRKTRKKEDENVLSRRGSSSSEGRRRGRDMSSPDKDESE
GTRKYAGLTCHQCKIMMSSKTDLVFCSICINKRYCKDCITRWYPERTPEGVKAACPFCMG
NCNCRACLREPLAVKIQSEKDDNVKLKQLQYLLVKVLPVLRAIYTEQDNELEIETAIRGV
PVTESDVAKCEVHPSVRIYCDLCSTSIANFLRSCQNPNCSSDICLSCCKELRDGESFSNS
DGTIPCPPKERGGCGTSTLELRRLRKRDLVQKLITDAEELTLHTKPQDVDFAHECSSCTA
SSRRQAASRKNGHDNFLYSPNALDLAEDDNAHFQSHWIKAEPVIVRNVLEKTSGLSWEPM
VMWRACREMDPKANCKGEAKAVKAVDCLDWCEVEINIHQFFDGYLKGRMHCNGWPEMLKL
KDWPPSALFEERLPRHNDEFMSALPFFDYTDPESGILNLATRLPDGSLKPDLGPKTYIAY
GFHEELNRGDSVTKLHCDVSDAVNVLTHTTKVDLTPRQYQRIKLEQRRYAKAQLRKQQEN
KSLGEVDKDEIILIENEEDLKNCNGLLGEQSLKDKASKEEPSNSIAGPSRSQKGECTKVE
RADDPMEGSSSLYSCTGAMESGHDPKVDVGLITQENVTVKYESIADENHDNVCLKTGRLS
PSQREADSSVENELKMPTKETEMMPTLPSTPPWDEEDRPPRPVVSTSAESIQEQKLDAPK
ETNESSKAVHGGAVWDIFRREDVPKLVEYLKRHKHEFRHLYNEPVKSVSHPIHDQSMFLN
ERQKKQLKEEFDIEPWTFVQHLGEAVFIPAGCPHQVRNIQSCIKVALDFVAPESVEECLR
LTEEFRRLPKVHRSNEDKLELKKIVLHAASSAIREAKKLVQKSKIQ
NT seq 2661 nt   +upstreamnt  +downstreamnt
atggaggaaaggaagggtaagcggattaggtcagaggaagatcccccgagatcttctgac
aagcgacgtaagacgaggaagaaggaagatgagaatgtcctgagcagaagaggatcttcg
agttctgagggaagaagaagaggaagagacatgtcttctcccgacaaggatgagtctgaa
ggaacaagaaagtatgctggtttgacttgtcatcagtgtaagatcatgatgagtagtaag
actgatcttgtcttctgttcaatatgtatcaataagcgctactgcaaggactgcatcact
agatggtatccagagagaacacccgagggagttaaagctgcttgtcctttctgtatgggg
aattgcaactgcagagcttgtttgcgagagcctttggccgtcaagatacaaagtgaaaag
gatgataatgtcaagctcaagcagttgcagtacctattagttaaagtccttcctgttctt
agggctatttatacagagcaggacaatgaactagagattgaaacagcgattagaggagtg
cctgtgacagaatctgatgttgctaagtgcgaggttcatccaagtgtacgcatatactgt
gacctctgcagcacatccattgccaattttctcagaagctgtcagaacccaaattgttct
tccgacatatgtctctcttgctgcaaggaactgagagatggcgagagtttctctaactcc
gacggtaccattccctgcccaccaaaggaacgtggtggttgtggtacctcaacactggag
ttgagacgtttgcgcaaacgtgatttggtccaaaaactgataaccgatgcagaggaactt
actctacacactaaaccacaagatgtggattttgctcatgaatgttcctcatgcactgcc
agttctagaaggcaagctgcttctaggaagaacggtcatgataacttcttatactcccca
aacgctcttgatctagccgaagacgacaatgctcatttccagtcgcattggataaaggca
gagcctgttatagtcagaaacgttctggagaagacatcaggactaagctgggagccaatg
gttatgtggagggcgtgtagagaaatggatcctaaggctaattgcaaaggtgaggcaaaa
gctgtgaaggctgtggactgcttggactggtgtgaggttgagataaacattcatcagttt
ttcgatggctacttaaaagggagaatgcattgcaacggttggccagagatgttgaaactg
aaggattggcctccatcagctttgtttgaagagcggcttccgaggcataatgatgagttc
atgtctgcgttgcctttctttgattacactgatccagagtctggtatcttgaatcttgct
acaagacttccagatggatccttgaagccagatcttggaccaaagacgtacattgcttat
ggtttccatgaggagcttaatagaggagactctgtgacaaagctacattgtgatgtttct
gacgcggtcaatgtgctgacacacacaactaaagtggatttaactcccagacaataccaa
aggataaaattagaacagagaagatatgcaaaagcacaattgcgtaaacaacaggaaaac
aagtcactgggagaagtagataaagatgaaataatcttgattgagaatgaggaagattta
aagaattgcaatggtcttttgggggaacagagcttgaaggacaaggcatctaaagaagaa
ccatcaaacagcattgctggaccgtccagatcacaaaaaggtgaatgtactaaagttgaa
agagctgatgatcctatggaaggatcttctagtttgtattcttgcactggtgctatggag
tcaggtcatgatccaaaggtggatgtgggtttgataactcaggagaatgtaacagtgaaa
tatgaatcaattgctgacgagaatcatgataacgtctgtttgaagacagggagattatct
ccaagtcaaagagaagctgattcatccgtggagaatgaactaaagatgccaacaaaggaa
actgagatgatgccaacacttccttcaactcccccgtgggatgaagaagataggccccca
cggcctgtcgtcagtacaagtgcggaatcaatacaagagcagaaactagatgctccaaaa
gaaacaaatgagagttcaaaggctgtgcacggtggtgctgtgtgggacatctttcgaaga
gaggatgttccaaaacttgttgagtatttgaaaaggcacaagcatgagtttcgtcacctc
tacaacgaacctgtgaaatctgtgtcacacccaattcatgaccaaagtatgttcttgaat
gaaagacagaagaaacagctcaaggaggagttcgatatagaaccatggacctttgtgcaa
cacctcggtgaagctgtctttatccctgcaggttgtcctcaccaagtgaggaacatacag
tcatgcataaaggtggcactagattttgttgcccctgaaagcgtagaggaatgtcttagg
ctaacagaggagttccggagactaccaaaagttcacagatccaacgaagataaactagag
cttaagaagatagtgctgcatgctgccagctcagccataagagaggcaaaaaagctagtg
caaaagtccaagatacaatga

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