Brassica oleracea (wild cabbage): 106318860
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Entry
106318860 CDS
T04124
Name
(RefSeq) uncharacterized protein LOC106318860
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106318860
Enzymes [BR:
boe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
106318860
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106318860
Prokaryotic type
106318860
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Acid_PPase
Motif
Other DBs
NCBI-GeneID:
106318860
NCBI-ProteinID:
XP_013612462
LinkDB
All DBs
Position
C9:49069829..49072463
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AA seq
509 aa
AA seq
DB search
MAKSLHFTRLMSSSARMALTSHFFLSIKPRNIHKPYFFSSTPYPLQYDMIINRPTQSSLS
QPRRRPQPPRAIESTSSPDPDFDSWVDNKLASEREKGRPGSGDPEMDKEKRKYYSKRRKR
LYGSDSEDEGGRKSDEGFVELKPEVVEFDRLHQREEELYFYDTFAYPWEKDKHYKMVYQL
EKKYYPDQGLDKAFLQPGESPSGKVTGKKKRVGGDAENCDDEKLVFFDEVKEKEKVEESV
TVKKVEQFFKGLTKSANERGVASGGGGGDGEPFLVTRNGELPPRWDGPNGTVLLVNKPKG
WTSFTVCGKLRRIVKVKKVGHAGTLDPMATGLLIVCVGRATKVVDRYQGMIKGYSGVFRL
GEATSTLDADSPVIQREPWEHIKDDDIKKALTSFLGEIWQVPPMFSAIKVGGEKMYDKAR
RGETVELSPRRISIFRFDIERSLDDRQNLIFRVVCSKGTYIRSLCADLAKALGSCAHLTA
LRRDSIGEYSANDAWEFNELEAAITKNYF
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatctctacacttcaccagactaatgtcatcatcagcaagaatggctctaact
tctcacttctttctctcaatcaaacctagaaacatccataaaccctacttcttctcctca
actccgtacccactccaatacgacatgatcatcaaccgccccacacagtcctccctctcc
caaccccgacgccgcccccaaccccctcgagccatcgaatccacctcctcccccgacccg
gacttcgactcctgggtcgacaacaaactcgcctcggagcgcgaaaagggccgacccggt
tcgggagacccggagatggacaaggagaagaggaagtactacagcaagaggaggaagagg
ctgtacggatctgattctgaggacgaaggagggaggaaatcagatgaaggattcgtggag
ctgaagcctgaggtggtggagttcgataggttgcatcagagggaagaggagttgtatttc
tacgatacgtttgcgtatccgtgggagaaagataagcattataagatggtgtatcagttg
gagaagaagtattaccctgatcagggcttggataaggcgttcttgcagcctggagagtct
ccctccgggaaagttactgggaagaagaaaagggttggtggtgatgcggagaattgtgat
gatgagaagttggtgttttttgatgaagtgaaggagaaggagaaggtagaggagagtgtt
actgtgaagaaagtggaacagtttttcaagggtttgacgaagtcagctaatgagagaggt
gtggctagtggtggtggtggtggtgatggagagccttttcttgtgaccaggaacggtgag
cttcctcctaggtgggatggtcctaacggtacagtgcttttggtgaacaaacccaaagga
tggacttcattcaccgtctgtggtaagctacgacgaatagtcaaagtgaaaaaggttggt
catgctggaacacttgatcctatggctactggtctcttaatcgtctgtgttggaagagcc
accaaggtggttgacaggtaccaagggatgatcaaaggttatagcggagtttttcgtctt
ggtgaagccacttcaactttagacgctgactctcctgtgattcaacgagagccttgggag
catattaaggacgatgacattaagaaagctttgacatcttttcttggcgagatatggcaa
gttcctccaatgttctcagcgattaaagttggaggtgagaagatgtatgacaaggcaaga
agaggagaaactgtagagctttctcccagacgtatctcgatttttcggtttgacattgaa
cgcagtttagatgacagacagaatctgatcttccgagttgtatgctccaagggtacatac
ataagatctctctgtgcagatcttgctaaagctcttggaagttgtgctcacctcactgct
ctccggcgagactcaatcggtgaatattctgctaacgatgcttgggagttcaatgagtta
gaagcagcaatcaccaaaaactacttctag
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