Brassica oleracea (wild cabbage): 106334366 Help Entry 106334366         CDS       T04124                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL3   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism boe  Brassica oleracea (wild cabbage) Pathway boe04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:boe00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     106334366  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:boe04121]     106334366 Enzymes [BR:boe01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      106334366 Ubiquitin system [BR:boe04121]  Ubiquitin ligases (E3)   HECT type E3    106334366 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HECT HEAT_EZ UNC45-central Motif Other DBs NCBI-GeneID:  106334366 NCBI-ProteinID:  XP_013628114 UniProt:  A0A0D3BJ86 LinkDB All DBs Position C3:complement(53210718..53219111) Genome browser AA seq 1893 aa AA seqDB search METRSRKRAEATSTAPSSSSSSPPPPPSGPTTRSKRARLSSPSSSSAAAATTATAPSSST RSRSSRSAATATATAAVTPMDTSTESSGFRRGGGRGNRGNDNTNSDKGKEKEHEVRIRDR ERDRARQQLNMDAAAAAAAAEEDDDNDSEDGNGGFMHPNMSSASSALQGLLRKLGAGLDD LLPSSGIGSGSSSHLNGRMKKILAGLRSEGEEGKQVEALTQLCEMLSIGTEDSLSTFSVD SFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFVARLLTIEYMD LAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVAVSTAANMCKKLPSDAS DYVMEAVPVLTNLLQYHDAKVLEYASICLTRIAEAFASSPDKLDELCNHGLVTQAATLIS ASNSGGGQASLGVSTYTGLIRLLSTCASGSPLGCRTLLLLGISSILKDILSGSGVSANAS ISPALSRPADQIFEIVNLANELLPPLPEGSISLPTSANALVKGSGQKNSSPSTSGKQEDS PKVSPREKLLCDQPELLQQFGLDLLPVLVQIYGSSVNGTIRHKCLSVIAKLMYFSTPEMI QSLIGDTNISSFLASVLAWKDPQVLVPALQVAEILMEKLPETFSKVFVREGVVHAVDQLV LVGKPSANASTDQENDCVPGSARSRRYRRRSSNANSDGNQSEELKNSVSASIGATHNSME SPTASFMLRETVSSCAKAFKDKHFPSDGGEFDVGVTDDLLHLKNLCTKLTAGTNDHKVKG KGKSKVSGPCLGDFSASKEEYLIGIISEILGELSKGDGVSTFEFIGSGVVAALLNYFSYG YFSKEKISEVDLPKLRQDGLRRFKAFLEIALPSDGNEGKIPPMTVLIQKLQDALSSLERF PVVLSHPSRSLSGSARLSSGLSALAHPLKLRLCRAPGEKALRDYSSNIVLIDPLASIAAV EEFLWPRVQRSESGVKAAAPAGNTEPGTLPSGAGVSSPSSSTPASTTRHSSRSRSAIKIG DASKKEPVHEKGTSSSKGKGVMKPAQPDKGPQTRSSAQRKAVLDKDTLMKPASGDSSSED EEMDISPVDMDDALVIEEEDISDDDDDDDEEDVLDDSLPMCTPDKVHDVKLGDAVDDEGA GLAPSGRQMNSALAGSSGTATARGSNSTDAGIGNLYGSRGALSFAAAAMAGLGAASGRGI RGSRDLHGRTLNRSSDESSKLMFTAGGKQLSRHMTIYQAVQRQLMLDEDDDDRLGGSDFI SSDGSRLNDIYTIMYQMPDSQANRLSAGGASSTTPSKSTKSATTNASVEAQSYRASLLDS IVQGKLPCDLEKANSTYNVLALLRVLEGLNQLGPRLRAQTISDRFAEGKITSLDDLNTTA AKVSHEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTTACPFLFPFQTRRQYFYSTA FGLSRALNRLQQQQGADGSGSTNEREMRIGRLQRQKVRVSRNRILDSAAKVMEMYSSQKA VLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVSLGMWRSNSGDKLSMQTDRDEIQDGKSAA ARDRDIVQAPLGLFPRPWPSTADVSEGSRFHKVVEYFRLLGRVMAKALQDGRLMDVPLST AFYKLILGQELDLHDVIIFDTELGKTLQELRVLVGRKHYLEAEGGDNSSVISDLCLRGSR IEDLCLDFTLPGYPEYILRPGDDIVDINSLEDYISLVVDATVKRGVARQIEAFRSGFNQV FDIKSLQVFTPSELDYLLCGRRELWEAETLVEHIKFDHGYTAKSPAIIFLLEIMGELTAD QQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSTSNAAANGTGASETADDDLPSVMTC ANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS NT seq 5682 nt NT seq  +upstreamnt  +downstreamnt atggaaactcggagccgcaagcgtgcggaggcgacctcaactgccccatcttcttcttct tcgtctcctcctcctcctccctcaggtcccaccactcgcagcaaacgcgctcgcctctcg tctccctcttcctcttcagccgccgccgctaccaccgctactgcaccttcctcctccacc cgctctcgttcttctcgctctgccgctaccgctaccgctacagccgccgttactcccatg gacacatccaccgagtcttctggattccgccgcggcgggggacgaggtaacaggggaaac gataatactaattctgataagggaaaggagaaggagcatgaggttaggattagggataga gaaagagaccgagccagacagcagctcaacatggacgctgcagctgctgccgccgccgct gaagaggacgatgacaatgatagtgaggatggcaacgggggattcatgcatcccaacatg agctcagccagcagtgcgttacaagggttgctgaggaagcttggagctggacttgatgac ttgcttccttcttcaggtattggctcaggttcttcttcccatttaaatgggaggatgaag aagatactcgctggcttgcgctctgaaggagaagagggaaagcaggtcgaggctttgacc cagctctgcgagatgttatccattggcaccgaagactccttgagcaccttctctgttgat tccttcgtccccgttcttgttggtctacttaaccatgagagcaatccggatattatgctt cttgctgccagggctcttacccatctgtgtgatgttttgccctcttcttgtgctgctgtt gttcattacggggctgtttcatgctttgtcgccagattgctaaccattgaatacatggac ttggccgagcagtctctgcaagctctcaaaaagatatctcaggaacacccaacggcctgt ttgcgagctggtgctcttatggcagtgctatcatatctggatttcttctccaccggtgtc cagcgtgtagcagtctctaccgctgcaaatatgtgcaagaagttaccttctgatgcatct gattatgttatggaagctgtaccggtactgacaaacctacttcagtatcatgatgcgaag gttttggaatatgcttctatctgtttgactcggattgccgaagcatttgcatcgtcccct gataaattagatgaattatgcaaccatggcctggtgactcaagctgcgactcttatatcc gctagcaactcgggaggtgggcaagcatctcttggtgtttcaacatacacgggattaatc cgattactttccacctgtgcgagcggttcacctcttgggtgcaggacattacttcttctc ggtattagtagcattcttaaggatattctgtcgggttctggtgtctctgctaatgcatct atatccccagcactgagcaggcctgcagatcagatttttgagatagtcaacctagcgaac gagctcctccctccattgccagaaggaagtatctcccttcctactagcgcaaacgcgtta gtgaaaggttcaggccaaaaaaattcttctccaagtacttcaggaaaacaagaagattct cccaaagtttcacctagagaaaaattactttgtgatcaacccgaacttttgcagcaattt ggattggatcttcttccagttttagtgcagatctatggttctagtgtcaatggtactatt cgtcataaatgtctctccgttatcgcaaagttgatgtatttcagcactccagaaatgatt caatctctaattggtgacacaaatatatcgagcttcttggctagtgtcttggcatggaaa gatccacaagtcttggttcctgctctacaagttgcagaaattctgatggaaaaacttcct gaaactttctcgaaagtgtttgtgagggaaggggtggttcatgctgtagatcaacttgtc ttggttggtaaacctagtgctaatgcttctactgatcaggaaaatgactgtgtgcctgga tctgcacgatctaggcgttacagacggcgaagtagtaatgccaattctgatggaaatcag tcggaagagcttaagaattctgtgtcagctagcataggtgcgacccataattccatggaa tctcctacagcgagcttcatgctaagggaaacagttagctcctgtgcaaaagcattcaaa gacaagcacttcccgtctgatggtggggaatttgatgttggagttacagatgatctcttg catctgaagaatctttgcacgaagctaactgctggtacaaatgatcataaagtgaaagga aaggggaaatctaaagtctctgggccatgccttggcgatttttctgctagcaaagaagaa tacttgattggtatcatctccgagatacttggcgagctaagcaaaggggatggcgtctca acttttgagtttattggcagtggtgtggtagcagcattgcttaactatttttcttatgga tacttttccaaagagaagatctccgaggttgatttgcccaaacttcgccaggatgggctc agaaggttcaaagcttttctagaaattgcacttccttctgatggtaatgagggaaagatc cctcctatgactgttttgattcagaaacttcaagatgctttgtcttcactggaacgcttt ccggtcgtccttagccatccctcaaggtcactcagtggaagtgctcgtctctcatctggg ttgagtgctttggcacatcctttgaagttgcggttatgccgtgcacctggagagaaggct ctacgtgattactcctccaatattgttctcatagatccattggcaagcatagcagcagtg gaggaatttctctggccccgagttcaacgcagtgaatctggggtgaaggcagcagcgcct gctggaaacactgagccaggcacattacctagcggtgctggtgtttcatcaccatcctcg tcaactccagcttccaccactcgtcattcttctagatctagatcagcaattaaaataggc gatgcctcaaagaaagaacctgtgcacgagaaaggtaccagctcatctaaaggtaaaggt gttatgaagccggctcagccggataaggggcctcagacaaggagcagtgctcaaaggaaa gctgttcttgacaaagatacactaatgaaaccagctagcggagactccagctctgaggac gaagaaatggatatatcccccgtcgacatggatgatgctttggtgattgaagaggaagac atttctgacgacgatgatgatgatgatgaggaggatgtcttggatgacagtcttcccatg tgcacccctgataaggttcatgatgtaaaattgggagacgcagtggatgatgagggagcc ggcctagcacctagcggccgacagatgaattcagctttggcaggaagtagtggaacagca actgcaaggggatctaattctactgatgctggcattgggaatctttatggttctaggggt gcactctccttcgctgctgcggcgatggcagggcttggagctgccagtggtagaggtatc agggggagtagagacctacatgggcgtaccctgaatcgaagttctgatgagtcctctaag ttgatgtttactgcgggaggaaagcaacttagtaggcatatgacgatatatcaggctgtg caacgacaacttatgctagacgaagatgatgatgacaggctcggtggcagcgatttcatc tcgagtgatggaagcagattaaatgatatatatactatcatgtaccagatgccggacagc caagcgaataggttgtctgctggtggtgcaagttctaccacaccatctaaatccactaaa tctgctactactaatgcaagcgtagaagcccagtcgtatagggcatctcttttggatagt atcgtacaaggaaagcttccatgcgaccttgagaaggcaaattctacgtataatgttttg gcgttgttgcgtgtactagagggtttaaatcagcttggccctcggttaagagcccaaacc atttctgatcgtttcgcagagggtaaaattacaagtctagatgatctgaatacaactgct gcaaaggtttctcatgaagaattcatcaacagcaaacttacacccaaattagctcgacag atccaggacgcgcttgctttgtgcagtggaagtcttccctcttggtgctaccagttgact acagcatgcccgtttttgtttccgtttcagacccggagacagtatttctattcaactgcc tttgggttgtcgcgtgcattgaaccgcttgcagcagcagcaaggtgctgacggcagtggt tctacaaatgaacgagagatgagaatagggagattgcagcgccagaaagtgcgggtatcc cgaaatagaatattagattctgctgcgaaagttatggagatgtattctagccaaaaagct gtgcttgaagtagaatattttggtgaagttggtactggtctaggccccacacttgagttt tacacactcctaagccatgatttgcaaaaggtttcccttgggatgtggagatcaaattct ggtgacaagttatctatgcaaactgatagagatgagattcaagacggtaaatctgcagca gctagggacagagatatagttcaggcaccacttgggttgttccctcggccctggccctca actgctgacgtatctgaaggtagtcggtttcataaagttgttgaatatttccgcctttta gggcgcgtgatggcaaaggcacttcaagatggacggctaatggacgtcccgttaagtaca gctttttataagctcattcttggtcaagagcttgatttgcatgatgttataatatttgat actgaacttggcaagactttgcaagagcttcgtgttcttgttggccgtaagcactatctg gaagcagaaggtggtgacaacagtagcgtgatttctgatttatgtttacgtggatcccgt attgaagatctttgcttggacttcaccctacctggctatcctgaatacatattgagacca ggagatgacattgttgatattaatagtcttgaggactatatatccctggtcgttgatgcc actgtcaagagaggagttgcccggcagattgaagccttcagatctggattcaatcaggtc tttgacataaaatctttacaagtattcaccccttctgagctggactacttgttatgtggt cgtagagagttgtgggaggcggagactcttgttgaacatatcaagtttgatcacggttat actgcaaaaagtccggcaatcattttcttactggagatcatgggagagcttacagcagat caacagcgtgctttctgccagtttgtaactggagctcctaggcttcctcctggtggctta gctgttctcaacccaaagctgacgattgtgagaaagctctcatcaacctcaaatgcggct gccaatgggacaggggcttcggaaacagcagacgacgatcttcccagcgtcatgacttgc gccaactaccttaagctccctccttattctacaaaggaaatcatgtacaagaaactgctc tacgcgatcaacgaagggcagggatcgttcgacctctcctag

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