Brassica oleracea (wild cabbage): 106335932
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Entry
106335932 CDS
T04124
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-2
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106335932
Enzymes [BR:
boe01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
106335932
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
106335932
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
106335932
NCBI-ProteinID:
XP_013630074
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All DBs
Position
C3:5714153..5715804
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AA seq
250 aa
AA seq
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MAPRWKWKGAEAKALAEPISKSISELQLSLAKTESSGSLSSCNVLLAVEPEQAELLDRCC
FGRLVLSAEKVKKWIQLSFEEAFYFLYILKCIKLTLQGRCLENEVDTWMYMRSKRPNFPV
FFKAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLVQSGDSDRLRVWSDVHCA
VRLSGSVAKTLLTLHVSGNSNQEDLNLPTCLENYRVEEQTISRWSPELSREDETTSPTPK
VTNVSNLKTP
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaagatggaaatggaaaggagccgaagcaaaagctcttgcagaacctatttca
aaatcaatctcagagctccaactctctctagccaaaacagagtcatcgggctccctctcg
agttgcaacgtgctcctagctgttgaaccagagcaagctgagctactcgaccgctgttgt
ttcggcagactcgtcctatccgctgagaaagtcaagaaatggattcagttatcctttgaa
gaagctttctattttctctacatcctcaaatgcatcaaactcacccttcaaggccgttgc
ttggagaacgaagtcgacacgtggatgtacatgagatctaaaagaccaaacttcccggtt
ttcttcaaagcttattcacatctacgatccaagaactgggttttgagatccgggttgcag
tacggtgtggatttcgtggcgtaccgtcaccatccatcacttgtccattcggaatactct
gttttggttcagtccggtgacagtgatcggttaagagtgtggtctgatgtccactgtgct
gttcggttaagcggaagtgttgctaaaacgttgttaactcttcatgtcagtggtaactct
aaccaagaggatttgaatctacctacgtgtttggagaactacagagttgaagagcaaacg
ataagtagatggagcccagaactcagtcgtgaagatgaaactacaagtccaacaccaaaa
gttaccaatgtgagtaatttgaaaacgccatga
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