Bordetella sp. H567: AKI39_00010
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Entry
AKI39_00010 CDS
T04979
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
boh
Bordetella sp. H567
Pathway
boh03030
DNA replication
boh03430
Mismatch repair
boh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
boh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKI39_00010
03430 Mismatch repair
AKI39_00010
03440 Homologous recombination
AKI39_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boh03032
]
AKI39_00010
03400 DNA repair and recombination proteins [BR:
boh03400
]
AKI39_00010
Enzymes [BR:
boh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKI39_00010
DNA replication proteins [BR:
boh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKI39_00010
DNA repair and recombination proteins [BR:
boh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKI39_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
C4bp_oligo
Motif
Other DBs
NCBI-ProteinID:
AOB33276
UniProt:
A0A1B2R8G9
LinkDB
All DBs
Position
1467..2576
Genome browser
AA seq
369 aa
AA seq
DB search
MQLVQTTRDALLKPLSTVAGIVERRHTLPILANILMRKEANKVSFIATDLEVQITTQADF
GVGSDNESITVAARKLLDILRALPDTGDVKLALASNKLSVQTGKSRFALQTLAASEFPTV
AQPEQWDVSLTLTQKNLRHLLNMVYFAMAQQDIRYYLNGMLMVFEPGRLRAVATDGHRLA
HCATDAEGITERHEVIVPRKTVLEMQRLLEDSDAPVSVDVAPGQIRFRFGDVELVSKLVE
GKFPDFTRVIPTSYTRHFVVNREALQGSLQRAAILTTDKFKGVRLQLAQNVMKISSSNAE
QEEAQEELDIDYGHEALDVGFNVSYLLDVLSNVKVEEIKWSVMPDQNASALITLPDDDNF
KYVVMPMRI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgtacaaaccacacgcgatgcattgctgaaaccgctatcgactgtggcgggc
atcgtcgaaagacgccataccctgcccatccttgcgaacatcctgatgcgcaaagaggcc
aacaaggtatcgttcatcgcgacggatctggaagtgcagatcacgacgcaggccgacttt
ggcgtgggttccgataacgagtccattaccgtggccgcgcgcaagctgctggacatcctg
cgcgcgctgccggacacgggtgacgtcaagctggcgctggccagcaacaagctgtcggtg
cagactggcaagagccgtttcgcgctgcagacgctggcggccagcgaattccccaccgtg
gcccagcccgagcaatgggacgtgtcgctgacgctgacccagaagaacctgcgacacctg
ttgaacatggtgtatttcgcgatggcgcagcaggacattcgctattacctgaacggtatg
ctgatggtgttcgagcccggtcgcctgcgtgccgtggccaccgatggccaccgcctggcg
cactgcgccaccgacgccgagggcatcaccgaacggcatgaagtcatcgtgccgcgcaag
acggtgctggaaatgcagcgcctgctggaagactccgacgcccccgtctcggtcgacgtc
gcgccggggcagatccgtttccgcttcggcgacgtcgagctcgtttccaagctggtcgaa
ggcaagttcccggatttcacccgcgtgattcccaccagctacacgcggcatttcgtggtc
aatcgcgaagccctgcagggcagcctgcagcgcgccgccatcctgaccaccgacaagttc
aagggcgtgcgcctgcagctggcgcagaacgtgatgaagatttcgtcttccaacgccgaa
caggaagaggcgcaggaagaactcgacatcgattacggccacgaggccctcgatgtgggc
ttcaacgtcagctatctgctggacgtcctgagcaacgtcaaggtcgaggaaatcaaatgg
tccgtgatgccggaccagaatgcctctgccctgatcacccttcccgatgacgacaacttc
aagtacgtcgtgatgccgatgcgcatctga
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