Bosea sp. Tri-49: BLM15_14180
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Entry
BLM15_14180 CDS
T05753
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
boi
Bosea sp. Tri-49
Pathway
boi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLM15_14180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boi03019
]
BLM15_14180
Enzymes [BR:
boi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BLM15_14180
Messenger RNA biogenesis [BR:
boi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BLM15_14180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZO78640
LinkDB
All DBs
Position
complement(2912892..2914367)
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AA seq
491 aa
AA seq
DB search
MTKFTDLGLAEPLLKALAAEGYETPTPIQAQAIPSIRDGRDLLGAAQTGTGKTAAFSLPM
LHRLMNQPRRMQLRSVRALILSPTRELAAQIEASIRTYAQFTPLKSTVIFGGVPVGKQIR
ALGQHVDILVATPGRLLDLVDQRAVSLREIEFLVLDEADQMLDLGFIHALRKIATLIPKQ
RQTLLFSATMPKAIREIASAYLTDPVEVAVAPVATTAEKVHQRVIFTEAGQKPALLAKTL
SVPEMERAIVFTRTKHGADKVVRQLDQSGIASAAIHGNKSQGQRERALGAFRDGELRILV
ATDIAARGIDVDGISHVVNFDLPNVPETYVHRIGRTARAGASGVAIAFCTPEERGDLAAI
EKLTKIALTPIGDVPHWDGRTPKKPPQNRGGRSQGQGRPQAQNGQRRDGRGGQGRNGQRP
EQGERQEQRREQPRPHQARQEQPRHERPAPRHEAGGARKEAVSGKEGLGGVAFLQQRTEQ
RRTGGGRRRPN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaagttcaccgacctcggcctggccgagccgcttctcaaagcgctcgccgccgaa
ggttacgagacgccgacgccgatccaggcgcaggcgatcccttccattcgcgacggtcgt
gacctgctcggggccgcccagaccggcaccggcaagacggctgcgttctcgctgcccatg
ctgcaccggctgatgaaccagccgcggcgcatgcagctgcgttcggtgcgcgcgctcatt
ctgtcgccgacccgcgaactcgcagcccagatcgaggcgagcatccgcacctacgcccag
ttcaccccgctgaagtcgacggtgatcttcggtggcgtgccggtcggcaagcagatccgc
gcgctcggccagcatgtcgacatcctcgtcgccacgcccggccgcctgctcgaccttgtc
gaccagcgcgccgtatcgctccgcgagatcgagttcctggtgctggacgaagccgaccag
atgctcgacctcggcttcattcatgcgctgcgcaagatcgcgacgctgattccgaagcag
cgccagactctgctgttctcagcgaccatgccgaaggcgatccgcgagatcgcctccgcc
tatctgaccgatccggtcgaggttgcggtcgcgccggtcgcgaccactgccgagaaggtc
caccagcgcgtcatcttcactgaggccggccagaagccggcgctgctggcgaagaccctg
agcgttcccgagatggagcgcgccatcgtcttcacccgcaccaagcatggcgccgacaag
gtcgtgcgccagctcgatcagtccggcatcgcgtctgccgcgatccatggcaacaagagc
cagggtcaacgcgagcgtgcgctcggcgccttccgtgatggcgaactgcgcatcctggtc
gcgaccgatatcgccgcccgcggcatcgacgtcgacggcatcagccatgtcgtcaatttc
gacctgccgaacgtgcccgagacctatgtccaccgcatcggccgcaccgcgcgcgccggg
gcgtcgggcgtggccattgccttctgcacgccggaagagcgcggcgatctcgccgcgatc
gagaagctgaccaagatcgcgctcaccccgatcggcgacgtgccgcattgggacggccgc
accccgaagaagccgccgcagaatcgcggcggtcgcagtcaggggcagggccggccgcaa
gcgcagaacggccagcgtcgcgacggcaggggcgggcagggccgcaacggccagcgtccg
gaacaaggtgagcggcaggagcagcgtcgcgagcagccgcggccgcatcaggcgcgacag
gagcagccgcgccatgagcgccccgctccacgccatgaggcgggtggcgcgcgaaaagaa
gcggtttccggcaaggaagggcttggcggcgtggcgttcttgcagcaaagaacggaacaa
cgacgcacaggcggcggacggcggcgcccgaactga
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