KEGG   Bordetella sp. J329: CBF45_13535
Entry
CBF45_13535       CDS       T05850                                 
Name
(GenBank) type I-F CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
boj  Bordetella sp. J329
Brite
KEGG Orthology (KO) [BR:boj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:boj02048]
    CBF45_13535
Enzymes [BR:boj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CBF45_13535
Prokaryotic defense system [BR:boj02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    CBF45_13535
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C Cas3_HD DEAD ResIII HD
Other DBs
NCBI-ProteinID: AZV94613
LinkDB
Position
complement(3053287..3056850)
AA seq 1187 aa
MNILLISQCSKRALTESRRILDQFAERRGDRTWQTSMTQAGLDTLRKLLRKTARKNTAVA
CHWIRGLDHSELLWIVGDARQFNEQGAVPTNTTRSDVLRVEDENTWHSLKIIQQLSALAA
LMHDLGKASDAFQDRLQGELTEKNLYRHEWVSVRLFQAFVTSCGGLADDRVWLQQLADAA
DAQDIASWAQQWTSPALQRDGLDGSPDVSMNPLTVLPPLARALAWLILSHHRLPAVPETA
SSQEAKVWHGKVQTGLNVGDLADVLGRIDANWNEPYTSALRREQAKARVRRYWQFSQPLP
VVASAWRKRAARMASGLLKTLPGQIPGSSACQMTDAPCDAYVMHLARLSLMLGDHYYSSL
GIDTHGKAVVERQAFLSAKNSLYANTTRHGGENVLNQTLDEHLLGVEQAASRVVHALPGL
TRQLAHLRNHKRLKMRSSNPRFRWQDKAVDCAAGLAGRSALQGAFIINMASTGCGKTLGN
ARIMNALANSQQGMRCAFAIGLRTLTLQTGRSFQQDLGLAEEELAILVGGTASRQLFEYY
ETVAENTGSASSRALLDETTHVVFEGNDQHPVLQYLGRDAGARKLLAAPLLVCTVDHLMP
ATESLRGGSQIAPMLRLMTGDLVLDEPDDFDLADLPALTRLVHWAGLLGTRLLLSSATLP
PALVQGLFMAYLEGRKRYQRNRGERPDESPSIPCLWVDEFSQQHVECTDAAAFEAQHLQF
VGKRAAELSMQTAKHARRRMQVSPLPKGLGQLASQERREAFAHTLLQAALSLHRHHHSVD
PKHRGGHEKRISFGLIRMANIAPLFDVALALFRQPVPAGVHIHLCVYHSQFPLFMRSAIE
HRLDGTLDRRDENAVFDLPDIRRAIDTHEESDQLFIVLGSPVTEVGRDHDYDWAVVEPSS
MRSLIQLAGRVLRHRPNKLIAQPNLLVCQTNLKHYEGRDGVAYCKPGFESRALVLQTHHL
ADLLKPWLDEQWQMAVDARLRIQPRPQHEWQPDRNLVDLEHQRLAEQMLPNGGAVGAGVA
APVRRNRLARQITAVPAGSASASVAKTAQLNASSFWLANNVCLTAAMQQAQPFRLETQPE
EELVFLPTEDEDDYRLYRIVEGPRKWERGYDEWELLNTRIAQEAVTHAQISCWGDADMMA
AMRAQAEEMDMPLRTFAEKFATVTLRINEGNNQGWYWHPWLGFARKG
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgaacatcctgttgatttcccaatgcagcaagcgggcgctgacagagagtcgccgtatt
ctcgaccagttcgccgagcggcggggggatcgcacctggcaaacgtcgatgacgcaagcg
gggctggataccttgcgcaagttattgcgtaaaaccgcacgtaaaaacacggcggtggct
tgccactggatacgcggtctggatcacagtgagttgctctggatcgtgggtgatgcgcgg
cagttcaatgagcaaggcgctgtacccaccaatacgacacgtagcgatgtcttgcgggtc
gaagatgaaaatacctggcatagcctgaaaatcattcagcaattgagtgcgctggcggca
ttgatgcacgatctgggcaaggccagcgacgcatttcaggatcgtctgcagggagaactc
acagagaaaaatctctatcgtcatgaatgggtatccgttcgcctatttcaggcctttgtg
acgagctgcggtgggctggcggatgaccgggtgtggctgcagcagctggctgacgccgca
gatgcgcaggatattgcctcgtgggcgcagcagtggacgagtccggcactgcaacgggat
ggactggatgggtcgccggatgtgtccatgaatcccttgacggtcttgccgccactggcg
cgggcactggcctggctgattctgtcacatcatcgcctgcccgcagtgccggagactgcc
agcagtcaggaggcgaaggtctggcatggcaaggtgcagaccgggttgaatgttggcgat
ctggctgatgtcctgggaagaatagacgccaattggaacgagccctataccagcgcactg
cgccgggaacaggccaaagcgagggtacgcaggtactggcagttcagccagcccttgccc
gttgtggcatcagcctggcgtaaacgtgccgcacgcatggcaagcggtttgttgaaaacc
ctgccgggacaaataccgggttcgtctgcttgtcagatgacggatgcgccatgtgatgcc
tatgtgatgcatctggcaaggctatccctgatgctgggagatcattattactccagtctg
ggtattgatacacacggtaaggcagtggtcgagcggcaagcgttcctgtcagccaagaac
agtctctatgccaataccactcgccatggcggggaaaacgtattgaatcagacactggat
gagcatctactcggtgtggaacaggctgccagccgggtggtgcatgccttgccagggctg
acgcggcagctggcacatctgcgcaaccacaaacgcttgaaaatgcgcagcagcaacccg
cgttttcggtggcaggacaaggcggttgactgcgcggccggcttggcagggcgttcagcc
ttgcaaggcgcgtttatcatcaatatggcgtccacaggatgtggaaaaacgctggggaat
gcacgcatcatgaatgcgctggccaattcccagcaaggcatgcgctgtgcgtttgcgatt
ggcttgcggaccttaacgctgcaaaccgggcgcagctttcagcaggatctggggctggcc
gaggaggaactggcgattttggttggtgggacagccagtcgtcaattattcgagtactac
gaaaccgtcgcagaaaatacgggttcggcttccagccgggcattgctagacgaaaccacg
catgtggtgttcgagggcaatgatcagcatccggtattgcaatatctgggacgggatgct
ggtgcccgcaaattgctggctgcaccgctactggtttgcacggtcgatcatttgatgcca
gcgactgaaagtctgcgtgggggcagccagattgcgcccatgctgcgcctgatgacgggg
gatctcgttttggacgagccagatgatttcgatctggcggatttgccagcattgacgcga
cttgtgcattgggcagggctgttgggtacgcggctgctgttgtcgtcggcaaccttgccg
ccagccctggttcaggggctgttcatggcctatctggaggggcgaaaacggtatcagcgt
aaccgtggggagcggccggatgaatcgcctagcatcccctgcctgtgggtggatgagttc
agccagcagcatgttgagtgtacggatgcagccgcttttgaagcgcaacacttgcagttt
gtcggcaagcgtgcagccgaattgagcatgcaaaccgccaagcatgcacgcaggcgtatg
caggtgtcacctttgcccaagggcttggggcaattggcatcacaggagcggcgtgaggcg
tttgctcatacccttttgcaggcggctctcagtttgcaccgacaccatcacagcgtggat
cccaaacataggggtgggcacgagaagcgtatcagcttcggcttgatacgcatggcaaac
atcgcgccgctatttgatgtggcactggcgttgttcaggcagcctgtgccggccggggtg
catattcatttatgtgtctatcactcgcagtttccgctattcatgcgctcggcgattgaa
caccggctggacggtacgctggatcgtcgggatgaaaatgccgtatttgacttgccggat
attcggcgagccattgatacgcatgaggaatcggatcagttgtttatcgtgttgggctcg
ccagtgacggaagtcggtcgtgatcacgattatgactgggccgtcgtcgagccttcttcc
atgcgttcattgatacagctggcgggccgggtgttgcggcatcgtccgaataagctcatt
gcgcagcccaatctattggtgtgccagaccaacctgaagcattacgaaggcagggatggc
gttgcctattgcaagccgggctttgaaagcagggcgttggtcttgcaaacacatcatctg
gctgatttgttgaaaccctggctggatgaacaatggcagatggctgtggatgccagactg
cgcattcagcccagaccgcagcacgaatggcagccggatcgcaatctggtggatctggag
catcagcgactggcagaacaaatgttgcccaatggcggggcagtgggggcgggtgtggcg
gcgccggtgcgtcgcaaccgactggcgcgtcagataacggcagttccggcgggcagtgcc
agtgcctcagtggcgaagacggcgcagctgaacgccagcagtttctggctggccaacaac
gtctgcctgacggctgcgatgcagcaggcacagccttttcgtctggaaacccagccagag
gaagaactcgtgttcctgccgacagaagacgaagacgattaccgcctctaccgtatcgtt
gaagggccccggaagtgggagcggggttatgacgaatgggagcttctgaatacccgtatt
gcgcaggaagccgtgactcatgcgcagatcagctgctggggggatgcggacatgatggca
gcgatgcgtgcccaggccgaggagatggatatgccgctgagaacattcgcggaaaagttt
gcgacggtgaccttgcggatcaacgaagggaacaaccaaggatggtattggcatccttgg
ctggggtttgcgcggaagggttga

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