Burkholderia oklahomensis E0147: DM82_2921
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Entry
DM82_2921 CDS
T03284
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bok
Burkholderia oklahomensis E0147
Pathway
bok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM82_2921 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bok03019
]
DM82_2921 (recQ)
03400 DNA repair and recombination proteins [BR:
bok03400
]
DM82_2921 (recQ)
Enzymes [BR:
bok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM82_2921 (recQ)
Messenger RNA biogenesis [BR:
bok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM82_2921 (recQ)
DNA repair and recombination proteins [BR:
bok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM82_2921 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Tuberculin
Motif
Other DBs
NCBI-ProteinID:
AIO65237
LinkDB
All DBs
Position
1:complement(3307834..3309681)
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AA seq
615 aa
AA seq
DB search
MSRALEILNEVFGYPAFRGQQGEIVEHVAAGGDCLVLMPTGGGKSLCYQIPALVRNEAGC
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALRDGDIDLLYVAPER
LMTPRFLDLLERARIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPDVPRIALTATAD
AITRDEIVQRLALDDARIFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFGIRQRHQEMFQREEGVVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
THKRVQTSKLDALLGLCETASCRRVRLLAYFGETSAPCGNCDTCIEPPATWDATREARMA
LSCVFRAQRASGFNFGASHLIEVLRGARNEKVLQRGHENLSTFGIGAELSEPEWRAIFRQ
LVAFGYLAVDHGGFGALVLTEASKPVLKGEETVTLRRYVKPARTRQSSGRSGARVDPTAG
MNPRERACWERLRAWRAEAAKSDGVPAYVIFHDATLAEIARNAPESIEDLRHIPGIGARK
LDRFGDEILEVVEAA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgcgctcgaaattctcaacgaagtctttggctatcccgccttccgaggtcaa
cagggcgagatcgtcgagcacgtcgcggcgggcggcgactgcctcgtgctgatgccgacg
ggcggcggcaagtcgctctgctaccagattccggcgctcgtgcgcaacgaggctggctgc
ggcgccggcatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgccgcgctt
tccgaagtcggcgtgcgcgccgcgtatctgaattcgacgctctccggcgccgaggcggcc
gcgaccgagcgcgcgctgcgcgacggcgacatcgatctgctctatgtcgcgcccgagcgg
ctgatgacgccgcgcttcctcgatctgctcgagcgcgcccgcatcggcctcttcgcaatc
gacgaggcgcactgcgtgtcgcagtgggggcacgatttccggcccgaatacatccagcta
tcggtgctgcacgagcgtttcccggacgtgccgcgaatcgcactgacggcgaccgccgac
gcgatcacgcgcgacgagatcgtccagcggctcgcgctcgacgacgcgcggattttcgtg
tcgagcttcgatcggccgaacatccgctaccggattgtcgaaaaggacaacgcgcgcgcg
cagctgctcgatttcatccgggcggagcacacgaatgcggacggcacgaccgacgcgggc
gtcgtctactgcctgtcgcgccgcaaggtcgaggagacggccgagtggctgaaggcgcaa
ggggttcgtgcgctgccgtatcacgcggggatggaattcggaatccgccagaggcaccag
gagatgttccagcgcgaggaaggcgtcgtcatgtgcgcgacgatcgcgttcggaatgggc
atcgacaagccggacgtgcgcttcgtcgcgcacctcgatttgccgaagagcgtcgaaggc
tactaccaggagacgggtcgcgcgggccgcgacggcatgcccgccaacgcgtggatggcg
tacgggctcggcgacgtggtccagcagcgcaagatgatcgacgagtcggacgccgacgac
acgcacaagcgcgtccagacgtcgaagctcgacgcgctgctcgggctgtgcgagacggcg
tcgtgccgccgcgtccggctgctcgcgtatttcggcgagacgagcgcaccgtgcggcaac
tgcgacacctgcatcgagccgccggcgacgtgggatgcgacgcgcgaggcgcggatggcg
ctgtcgtgcgtgttccgcgcgcagcgcgcgagcggcttcaacttcggcgcgagccacctg
atcgaagtgctgcgcggcgcgcgcaacgagaaggtactgcagcgcggccacgagaatctc
agcacgttcggcatcggcgccgagctgtccgaacccgaatggcgcgcgatcttccggcag
ctcgtcgcgttcggctacctcgccgtcgatcacggcggcttcggcgcgctcgtgctgacc
gaggcgagcaagccggtgctcaagggcgaggagacggtcacgctgcgccgctacgtgaag
ccggcgcgcacccgccagtcgtcgggccgcagcggcgcacgcgtcgatccgacggccggc
atgaatccgcgcgagcgcgcgtgctgggagcggctgcgcgcgtggcgggcggaggccgcg
aagagcgacggcgtgcccgcatacgtgatcttccacgacgcgacgctcgcggagatcgcc
cgcaacgcgccggagtcgatcgaagatctgcgccatattccggggatcggcgcgcgcaag
ctcgaccgcttcggcgacgagatcctcgaggtcgtcgaagcggcctga
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