Burkholderia oklahomensis E0147: DM82_4455
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Entry
DM82_4455 CDS
T03284
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bok
Burkholderia oklahomensis E0147
Pathway
bok03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DM82_4455 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bok03400
]
DM82_4455 (uvrB)
DNA repair and recombination proteins [BR:
bok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM82_4455 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM82_4455 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
AAA_16
Kinesin
UB2H
AAA_22
FlaG
Motif
Other DBs
NCBI-ProteinID:
AIO69570
LinkDB
All DBs
Position
2:838893..840983
Genome browser
AA seq
696 aa
AA seq
DB search
MSEHHPDTRDDLDESKFVTFDGSPFQLYQPYPPAGDQPTAITTLVEGVEDGLSFQTLLGV
TGSGKTYTMANAIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMILT
LRLGDKIGQREVIARLIAMQYTRNEQDFQRGTFRVRGDTIDIFPAEHAEMAVRVDLFDDE
VDSLHLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVMRAVETIKEELRERLEFFHREGKL
VEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPSDALMLLDES
HVLIGQLNGMYNGDRARKENLVDYGFRLPSALDNRPLKFPEFERKMRQVVFVSATPADYE
QRVSGQTAEQVVRPTGLVDPAIEVRPASTQVDDVLSEITERVKADERVLITVLTKRMAEQ
LTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGKAILYADRITDSMRRAIDETERRRAKQIAFNEQ
MGITPRGVVKRIKDIIDGVYNADEARAELKEAQQRAKFEDMSEKQIAKEIKRLEKQMADY
AKNLEFEKAAQTRDQLALLRERVFGANVGDHVSGVE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacatcatcccgacacccgcgacgatctcgacgaatcgaaattcgtgacgttc
gacggatcgccgttccagctgtaccagccgtatccgcccgcgggcgaccagccgaccgcg
atcacgacgctggtcgaaggcgtcgaggacggcctttcgttccagacgctgcttggcgtg
acgggctcgggcaagacctacacgatggcgaacgcgattgcgcggctcggccgcccggcg
atcgtgtttgcgccgaacaagacgctcgccgcgcagctctactcggaattccgcgaattt
ttcccgcgcaacgcggtcgagtacttcgtgtcgtactacgactactaccagccggaagcg
tacgtgccgcagcgcgatctcttcatcgaaaaggattcgtcgatcaacgagcacatcgag
cagatgcggctgtcggcgacgaagagcctgatggagcgtcgcgacgtcgtgatcgtcgcg
acggtgtcggcgatctacggtatcggcaatccgtccgagtatcaccagatgatcctgacg
ctgcgcctgggcgacaagatcggccagcgcgaagtgatcgcgcggctgatcgcgatgcag
tacacgcgcaacgagcaggacttccagcgcggcacgttccgcgtgcgaggcgacacgatc
gatatcttcccggccgaacacgcggagatggcggtgcgcgtcgatctgttcgacgacgaa
gtcgattctctgcatctgttcgatccgttgacgggccgcgtgcggcagaagatcccgcgc
ttcaccgtctatccgtcgtcgcactacgtgacgccgcgcgaaaccgtgatgcgcgccgtc
gagacgatcaaggaggagctgcgcgagcgtctcgagttcttccatcgcgagggcaagctc
gtcgaggcgcagcggctcgagcagcgcacccgcttcgacctcgaaatgctgcaggagctc
ggcttctgcaagggcatcgagaactattcgcggcacttctccggggcggcgccgggcgaa
ccgccgccgacgctcgtcgactacctgccatccgacgcgctgatgctgctcgacgaatcg
cacgtgctgatcggccagctgaacgggatgtacaacggcgaccgcgcgcgcaaggagaat
ctcgtcgattacggtttccggctgccgtcggcgctcgacaaccggccgctcaagttcccc
gagttcgagcgcaagatgcgccaggtggtgttcgtgtcggcgacgcccgctgattacgag
cagcgcgtgtccggccagaccgccgagcaggtcgtgcggccgacggggctcgtcgatcct
gcgatcgaggtgcggccggcgagcacgcaggtcgacgacgtgctgtccgagatcaccgag
cgcgtgaaggcggacgagcgcgtgctgatcaccgtgctgacgaagcggatggccgagcag
ctgaccgaattcctcgccgaccacggggtcaaggttcgctatctgcacagcgacatcgac
acggtcgagcgggtcgagatcatccgcgacctgcggctcggcacgttcgacgtgctggtc
gggatcaacctgctgcgcgagggcctcgacattccggaagtgtcgctcgtcgcgatcctc
gatgcggacaaggaaggctttctgcgcgccgagcgctcgctgatccagacgatcggccgc
gcggcgcgcaacgtgaacggcaaggcgatcctgtacgcggaccggatcaccgattcgatg
cgccgcgcgatcgacgagaccgagcgccgccgcgcgaagcagatcgcgttcaacgagcag
atgggcattacgccgcgcggcgtcgtgaagcggatcaaggacatcatcgacggcgtctac
aacgccgacgaagcgcgcgccgagctgaaggaggcgcagcagcgcgcgaaattcgaggac
atgtccgagaagcagatcgcgaaggaaatcaagcggctcgagaagcagatggccgattac
gcgaagaatctcgagttcgaaaaagccgcgcagacgcgcgaccagctcgcgctgctgcgc
gagcgtgtgttcggggcgaatgtcggcgatcacgtgagcggggtcgagtga
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