Cytobacillus oceanisediminis: A361_24245 Help Entry A361_24245        CDS       T04330                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism bon  Cytobacillus oceanisediminis Pathway bon02020   Two-component system bon02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:bon00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     A361_24245  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     A361_24245  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bon03021]     A361_24245 Transcription machinery [BR:bon03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      A361_24245 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Sigma70_r4 HTH_23 HTH_Tnp_ISL3 HTH_11 Sigma70_r4_2 GerE HTH_IclR HTH_5 MarR_2 MerR-DNA-bind HTH_20 HTH_24 HTH_21 PCI HTH_Crp_2 AbiEi_3 MarR HTH_38 Fe_dep_repress Motif Other DBs NCBI-ProteinID:  AND42123 UniProt:  A0A160MGG6 LinkDB All DBs Position complement(4828741..4830072) Genome browser AA seq 443 aa AA seqDB search MNLKAGLWQQQTMKLTMTQELTQAIALLQYSTQELSAFLESKALENPLLKVESGQVQTMD PRYDRVKPTRIKVEKDKINWIEQIGCGKTMMLDEYLKSQLHLKLNKDEKKVIEHLIESLD ENGYLRADLQTAAKALQMPLENMEQMLEELQELEPAGVGARNLQECLSLQIKRLPERNEL AEIILDEYFTFFAEKKWKEIAKQLGVGLKEIQEVFDLVQTLNPRPASSFQSEKSAYITPD VIIKWDGSSFSVSVFDEVLPKISFNEGYYKKFAASGDRNVSRFLQEKQQDYQWIMRSIEQ RKETLANVTLKIVEKQQDFFIKGPSHLKPMTMKEISDELDIHESTVSRAVREKYAQTPYG TYELRSFFSSTIKTTSDENTSSQQVKTIIGKMIEKENKQKPLSDQELVKLLKEEEGMVVS RRTIAKYRDQLGIPSSSKRKRYD NT seq 1332 nt NT seq  +upstreamnt  +downstreamnt atgaatttgaaagctgggttatggcagcagcagacaatgaaattaacaatgacacaggag ctgacgcaggcgattgcccttctgcaatacagcacacaggagctttctgcttttttggaa agcaaggcgcttgaaaatccccttttaaaagtagagtccggtcaagtccagacgatggat ccccgttatgaccgtgtcaaaccgacgaggataaaagtcgaaaaagataaaataaattgg attgagcagattggctgcggaaagacgatgatgctggatgaatatttgaagtcgcagctt catttgaaattaaacaaggacgaaaaaaaagtaattgagcatcttattgagagccttgat gaaaacggttacttgcgagcggatttgcagacagctgccaaggcgctccagatgcctctt gaaaatatggaacagatgcttgaagaattgcaggaactcgagcctgctggtgttggcgcg aggaatctccaggagtgcctttccctgcagattaagagattgccagagagaaatgaactc gctgaaattattttagatgaatactttaccttttttgcggagaagaaatggaaagagatt gccaagcagcttggtgtggggctaaaagagattcaggaggtattcgaccttgtgcagacc ttgaatcctaggccggcttcatccttccaaagcgagaaatcggcatatataacaccggac gtgataattaagtgggatggaagctccttttctgtaagtgtttttgatgaagtgcttcct aaaatcagttttaatgaaggttattataaaaagtttgcggcctctggagaccggaatgtc agccgcttccttcaggaaaagcagcaggattatcaatggatcatgaggagcatagagcag agaaaagagactcttgcgaatgtgacccttaaaatcgttgaaaaacagcaggacttcttt ataaaaggaccttcacatctgaagccgatgaccatgaaggaaatatcagatgaactcgat attcatgaatcaactgtcagccgtgctgtccgggaaaaatatgcgcaaacgccatatggg acctatgagctgaggtcgtttttctcaagcacgattaaaacaacatccgatgaaaatacg tcttcacagcaggtcaagacgataattggtaaaatgatagaaaaggaaaataagcaaaag cctttatccgaccaggagcttgtgaagctgctgaaggaagaagaggggatggttgtcagc agaaggacgattgcaaaatatcgggatcagctgggcatcccatcatcatctaaacggaaa aggtatgactga

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