KEGG   Bosea sp. PAMC 26642: AXW83_17900Help
Entry
AXW83_17900       CDS       T04264                                 

Definition
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bop  Bosea sp. PAMC 26642
Pathway
bop03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    AXW83_17900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bop03400]
    AXW83_17900
Enzymes [BR:bop01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AXW83_17900
DNA repair and recombination proteins [BR:bop03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AXW83_17900
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: AMJ61921
UniProt: A0A126P200
LinkDB All DBs
Position
3722823..3725375
Genome map
AA seq 850 aa AA seqDB search
MATLDLYRAKRDFSRTKEPKGGKGRKTAAEAGGVFIIHKHAARRLHYDLRLEHDGVLWSW
AVTRGPSLDPDEKRLAVHVEDHPLEYGAFEGTIPEGEYGAGSVIIWDEGRWVPEGDPAFG
LEKGHLSFILQGHKLAGQWHLVRLKPRRGEKRDNWLLIKVDDAAARSDEDILETAPDSVK
SGSSVEAVGRGEAPDAKVWAKTKRPGQKRPALDPAPPVKAANSRKASHKAPEGELLPSFV
PPCLATLQEKAPAGEAWLHEVKFDGYRMQARVSDGKTRLLTRSGLDWTDRFGATLEQALS
RLPCDSAIIDGEVVALGENSVSSFSALQDALSEARTEYLVYFAFDLLHLDGEDLRGEPLL
ARKERLEALLSAIPAKAPLRYSEHFREPGQTMLRHACRMGLEGVISKRADAPYRSGRGRD
WVKSKCSQRQEFVIAGYVPSKGSGRELGSILAAYHEDGILRPAGRVGTGFTRKSAAVLKG
KLDALKTVSSSFEGAAGREKGIVWVEPELVAEVEFGAWTASKTLRHASFIGLREDKPADE
VVPETPAEPVGETPEPKKPAVKPRRTLHAETTVVLSNPDKPLWPDIGLSKQDLLDYYATV
WPLMQPFVVDRPLSLLRAPNGIEGHSFFQKHGSPGMHKAISTRKDRDGEDLLFIRDFDGL
AALVQLGTVEVHVWGATMDAIETPDQIIFDLDPDTGVSVEAVRDAARSIRERLRELGFES
LLKLSGGKGFHVVVPLKPKADWARVKGFANTFAKAMEQAEPKRYTATLSKKARRGRIFID
YLRNGRGATAIAPYSTRARKGGAVSMPLPWSDLDEAVPDAFKAQDLLKAGAPEPVWNDFF
AMAKALTGAG
NT seq 2553 nt NT seq  +upstreamnt  +downstreamnt
atggcgacgctcgatctctatcgcgccaagcgggacttctcacggacgaaggaacccaag
ggcggcaagggccgcaagacggctgccgaggcgggcggcgttttcatcattcataagcac
gccgcgcgccgcctgcattacgacctcaggctggagcatgacggcgtgctctggtcctgg
gccgtgacgcgcggcccaagcctcgaccccgacgaaaagcgtcttgccgtccatgtcgag
gatcacccgctggaatacggcgccttcgaaggcacgatccccgagggcgagtatggcgcg
ggctccgtaatcatctgggacgagggtcgctgggtgccggagggcgaccccgccttcggc
ctcgaaaagggccatctctccttcatccttcagggccacaagcttgccggccaatggcac
ctcgtccggctcaagccacgtcgcggcgagaagcgcgacaactggctgctgatcaaggtc
gacgacgccgcagcccgcagcgacgaggacatcctcgaaaccgcccccgactcggtcaaa
tccggttcgagcgtcgaggccgtcggacgcggcgaggcccccgatgccaaggtctgggcg
aagacgaagcgcccaggccaaaagcgaccggctctcgaccccgctccgcccgtcaaggcc
gcgaactccaggaaggccagccataaagcccccgaaggcgagcttttgccgagcttcgtc
ccgccctgcctcgcgacgcttcaggagaaggcgcctgcgggcgaagcctggctgcacgag
gtcaagttcgacggctatcgaatgcaggcccgtgtctctgacggcaagacccgcctgctg
acgcgcagcgggctcgactggacagatcgtttcggcgccaccctcgaacaggccctgtcc
cgcctgccatgcgatagcgcgataatcgacggagaggtcgtggcgctcggcgaaaacagc
gtttcgtccttttcggcgctgcaggatgccctctccgaagcccgcaccgaatacctcgtc
tacttcgccttcgatctgcttcatctcgacggcgaggatcttcgcggcgagcctctgctc
gcacgcaaggaacggcttgaggcgctgctgagcgctattccggccaaagcccccctgcgc
tacagcgaacattttcgcgagcccggtcagaccatgctgcgccatgcctgccgtatgggg
ctggaaggcgtcatctccaagcgcgccgatgcgccctatcgcagcggccgcggccgcgac
tgggtcaagtcgaaatgcagccagcggcaggagttcgtcattgccggctacgtcccctcg
aaaggctcgggccgcgaacttggttcaatcctcgccgcttaccatgaggacggcatcctg
cgacccgccggccgcgtcggcaccggcttcacccgcaaatccgcggctgtgctcaagggc
aagctcgacgcgctgaaaacggtgagctcttccttcgagggcgctgccggccgggaaaag
ggcatcgtctgggtcgagccggaactcgtggccgaggtcgagttcggcgcctggaccgcc
tcgaagaccttgcgccacgcctccttcatcggcctgagagaggataagccggcagatgag
gttgttccggaaacaccggccgagcctgtaggcgaaactcccgagccgaaaaagcccgct
gtgaaaccacgccggacattgcacgccgagacgacggtggtcctgtccaaccccgataaa
ccgctctggcccgatatcggcctcagcaagcaggacctgctcgactactacgccaccgtc
tggccgctgatgcagcccttcgtcgtcgaccggccgctgagcctgctgcgtgcgcccaac
ggcatcgagggccacagcttcttccagaagcatggctcgccggggatgcacaaggcaatc
tccacccgaaaagaccgtgacggcgaggatctgctcttcatccgtgatttcgacggtctt
gccgcgctggtccagctcggaacggtggaagtccatgtctggggcgcgacgatggacgcc
attgagacgcccgaccagatcatcttcgatctcgatcccgacaccggcgtctcggtcgag
gcagtgcgcgacgcagcccgcagcatccgcgagcgcctgcgcgaactcggcttcgagagc
ttgctcaagctgtcgggcggtaagggttttcacgttgtcgtgcccttgaagcccaaagcc
gactgggcccgggtcaaaggtttcgccaacaccttcgccaaggcgatggagcaggccgag
ccgaagcgttacactgcgaccctgtcgaaaaaagcgcggcgcggccgcatcttcatcgac
tatctccgcaatggccgcggggcgaccgcgatcgcgccctactcgacccgcgcccgcaag
ggtggcgccgtctcgatgccgctgccctggagcgatctcgacgaggcggtccccgacgca
ttcaaggcgcaggatctcctcaaagcaggcgcgcccgagcctgtctggaacgatttcttc
gcgatggcaaaggcactcacgggcgcaggctag

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