KEGG   Heyndrickxia oleronia: I5818_23735
Entry
I5818_23735       CDS       T07202                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K20480  HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
bou  Heyndrickxia oleronia
Pathway
bou02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bou00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    I5818_23735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bou03000]
    I5818_23735
Transcription factors [BR:bou03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    I5818_23735
SSDB
Motif
Pfam: HTH_3 TPR_12 TPR_1 TPR_2 HTH_19 TPR_MalT TPR_8 HTH_31 TPR_16 SNAP DUF5640 NPA Yippee-Mis18 DXP_synthase_N
Other DBs
NCBI-ProteinID: QQZ04618
LinkDB
Position
4731115..4732380
AA seq 421 aa
MNIGAIIKLNRINQNLTQEDLADGIISISYLSKIENGKIEPNEEVIKLLCRKLGIQVNNQ
IDDSIREKCHEWFRLLLTSSDIAELKKMFVEITELLKVIHNSELQILVNIHMIRYYLKIG
DTDNAIQKVNSLKDVSGTFNNLQKYYWYKFNGNYYSIIEEENEALHNYTLAEDLIPSIEL
SQEEVADLQYALSVTYSKFRLTSEAQSYANKALEYYRQVYHFSRCAECHLVLGICYRRIN
NHDKAIKNYNLAKQLAESTDKKEIILLTHLNIGYLYFVKEDTTEAIKHLDIIINDNESPI
HMRLYAITSIIGKCYSINNLEETRKRIQQGLDLINSDNRSKYLAFYYEILCHLYLIDERN
EEFEELMVNKFIPYLKDTKNHAKLTEFSEMLGNYFWKKHKYKNAATYYNLVNNSYKKIIQ
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatatcggtgccatcataaaattaaatagaattaatcaaaacctaacccaagaagac
ctcgcagatggaattatttctatttcttatctatcgaaaattgagaatggtaagattgaa
ccaaatgaagaggtgatcaaacttctttgtcgtaaactaggaattcaagtgaataatcaa
atagatgacagtattagagaaaagtgtcacgaatggtttcgcttactattgacttcttcg
gatattgctgaattgaaaaaaatgtttgtagaaataactgaattattaaaagttatccat
aattcagagttacaaatactggttaatattcatatgattaggtattacttaaaaattggt
gatactgacaatgccatacaaaaagtgaattcattaaaggatgttagtggtacttttaat
aatcttcaaaaatactattggtataaatttaatgggaattattattcaatcattgaagag
gaaaacgaagctctgcataactacacattagccgaagaccttattccaagcattgaatta
tcccaagaggaagtggcagatttacaatacgcactttccgttacatatagcaaatttcgt
ttaacatctgaagcacaaagttatgcaaacaaagctttagagtattatcgacaagtctat
catttttctcgatgtgcagagtgtcacctagttcttggtatttgttatagaagaattaat
aatcatgataaggctattaaaaattataatttagctaaacaacttgcggagagcactgat
aagaaggaaattatactattaacacatctaaatatcggttatttatattttgtaaaagaa
gatacaacagaagcaattaaacatttggatattataataaatgataatgaatcaccaatt
cacatgcgattgtatgcaattacctcaattattggaaaatgttacagcataaataatttg
gaagaaacaagaaaaagaattcagcaaggtcttgatttaattaattcagataataggagt
aaatatttagcattttactatgaaattctttgtcatttatatctaattgatgaaagaaat
gaagaatttgaagaacttatggttaataaatttattccttatctaaaagatacaaaaaac
cacgccaaattaacagaattctcggaaatgctcggaaactatttctggaaaaaacacaaa
tataaaaacgctgcaacttattataacttagtaaataattcatataaaaaaattattcaa
atatag

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