Bordetella parapertussis 12822: BPP0813
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Entry
BPP0813 CDS
T00140
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bpa
Bordetella parapertussis 12822
Pathway
bpa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BPP0813 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpa03400
]
BPP0813 (mutM)
Enzymes [BR:
bpa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BPP0813 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BPP0813 (mutM)
DNA repair and recombination proteins [BR:
bpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BPP0813 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
C1_2
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CAE40222
UniProt:
Q7W185
LinkDB
All DBs
Position
complement(874590..875417)
Genome browser
AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLLAGRTVLECGRRGKYL
LLRFDHGVQIVHLGMSGSLRRVPEQEAPRKHGHVDWVFDHAVLRLHDPRRFGAVLWHPDE
AGPIAAHPLLARLGIEPFDPRFDGRWLHAYFRGRRVAIKQALLAGDAVVGVGNIYASESL
FRAGIDPRTAAQRVSAARCDRLAAAIRATLSDALDSGGSTLRDYVGASGEPGAYFAIHAA
VYERAGLPCRVCGAPIRRLVQGQRATYFCPSCQKR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcctgaagtcgagaccacccgacggggaatcgacaccgtcataacgggc
cggacgctacgccgcctggtcgtgcgcgaagcgcgcatgcgctggcccattccacccgcc
ctgcccgatctgctggccggccgcaccgtgctcgaatgcgggcggcgcggcaagtacctg
ctgctgcgcttcgaccatggcgtgcagatcgtgcatctgggcatgtccggatcgctgcgc
cgggtgcccgagcaggaggcgccgcgcaagcacggccacgtcgactgggtattcgaccac
gccgtcctgcggctgcacgatccgcgccgcttcggcgcggtgctgtggcaccccgacgag
gccggcccgatcgccgcccacccgctgctggcccgcctgggcatcgaaccgttcgacccg
cgctttgacgggcgctggctgcacgcctacttccgcggacgccgggtcgccatcaagcag
gccctgctggccggcgacgccgtggtgggcgtgggcaacatctacgcatcggaaagcctg
tttcgcgccggcatcgatccgcgcacggccgcccagcgcgtctcggcggcgcgctgcgac
cggctggcggccgccatccgcgccaccctgtcggacgcgctggattccggcggcagcacg
ctgcgcgactacgtcggcgccagcggcgagccgggcgcgtatttcgccatccacgccgcc
gtctacgagcgcgccggcctgccctgccgcgtgtgcggcgcgccgatccgccgcctggtg
cagggccagcgcgccacgtatttctgtccgagctgccagaaacgctag
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