Bacillus pacificus: LMD38_23085
Help
Entry
LMD38_23085 CDS
T07947
Name
(GenBank) tetratricopeptide repeat protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
bpac
Bacillus pacificus
Pathway
bpac02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMD38_23085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpac03000
]
LMD38_23085
Transcription factors [BR:
bpac03000
]
Prokaryotic type
Helix-turn-helix
Other families
LMD38_23085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
HTH_3
TPR_10
TPR_7
TPR_8
ANAPC3
TPR_19
RapH_N
TPR_6
TPR_14
HTH_31
SNAP
TPR_4
Fis1_TPR_C
TPR_16
T6SS_VasJ
TPR_11
Motif
Other DBs
NCBI-ProteinID:
UEP94164
LinkDB
All DBs
Position
complement(4458042..4459319)
Genome browser
AA seq
425 aa
AA seq
DB search
MQQTLEKIGKQVFYKRLQQKMTQEELCQGICSVSYLSKIENGKIEASEEILQLLCARLEI
AVTDLRDVEEDVKGKLDEWLNALIRLEKAQVERIYNELQEDMQHVLDFEIINYYKLLNIR
YLLMKRDLPVIAEELERLKKAYKKFSPFQKLLYTYSKGLLCCLQYKWKQGLSYLLETEAM
AKDLGYHETGIYYNIALTYSHLEIQHLTLHFANIALEAFRNEYKFRNVINCQILIALSYA
EQGQYEEALAMYESILRESEAFADKDVLKAITLSNIGNIHYKKKKYNQAKDYYLESLQLQ
KQIDLNYIDTLYEMALACIKLEQFEEAREWIDKGIVAAKREERFNTKLYLLLMLRNKYFE
EAREYKQFLELEAIPFYKSAGNKIELKKVYMELAEYFSKSLNFEQSNHYYKLVIEMLESH
KEDEK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaacattagaaaaaataggcaaacaagtcttttataagcggctacagcaaaaa
atgacacaagaagaattatgtcagggcatttgttctgtctcatacttaagtaaaatcgaa
aatggaaagatcgaagcatcagaagagattctacaattgctctgcgcaagattagaaatt
gccgtgacggatttgagagatgtagaagaagatgtgaaggggaagctggatgaatggctg
aatgcactaattcgtttggagaaggcacaggttgaacgtatctataatgaattgcaagaa
gatatgcaacatgttttagattttgaaatcataaattattataaactacttaatatacgt
tatttactgatgaaaagagatttgccagtaatcgcagaagaattagagaggcttaagaag
gcatataagaaattctcaccttttcagaagttgttgtatacgtatagtaaaggattatta
tgctgtttacaatataagtggaaacagggattaagttatttattagagacagaagctatg
gcaaaagatctaggatatcatgagacaggaatttattataatattgctcttacttatagt
catttggaaattcaacatcttacgttacactttgcaaatattgcactagaagcatttaga
aatgagtataaatttcggaatgtgataaactgtcaaattcttattgcattaagttatgcg
gaacaagggcaatatgaagaagctctagcaatgtatgagagcatactgcgggaatcagag
gcttttgcggataaagacgttctaaaggctattactttaagtaatattgggaatatacac
tataaaaagaaaaaatataatcaagcaaaagattattatttagagagtttacaacttcaa
aaacaaatagatttaaattatatagacacattatatgaaatggcattagcttgtattaaa
ttagagcagtttgaagaagcaagagaatggattgataaaggtattgttgctgccaaacgt
gaagagagatttaatacaaaattatatttactgctcatgcttcgtaataagtattttgaa
gaggcgcgagagtataaacaatttttggaattagaagctattccgttttataaatcagca
ggtaataaaatagaactgaagaaagtatatatggagcttgcggaatatttttctaaatca
ctaaactttgagcaaagtaatcactactataagctagttattgaaatgttagaaagtcat
aaggaggatgaaaaatga
DBGET
integrated database retrieval system
