Butyrivibrio proteoclasticus: bpr_I1909
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Entry
bpr_I1909 CDS
T01292
Name
(GenBank) ATP-dependent DNA helicase UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpb
Butyrivibrio proteoclasticus
Pathway
bpb03420
Nucleotide excision repair
bpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
bpr_I1909
03430 Mismatch repair
bpr_I1909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpb03400
]
bpr_I1909
Enzymes [BR:
bpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
bpr_I1909
DNA repair and recombination proteins [BR:
bpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
bpr_I1909
MMR (mismatch excision repair)
Other MMR factors
bpr_I1909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
ResIII
AAA_11
NACHT
AAA_12
JmjC_2
Motif
Other DBs
NCBI-ProteinID:
ADL34643
UniProt:
E0RXR7
LinkDB
All DBs
Position
1:complement(2327460..2329271)
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AA seq
603 aa
AA seq
DB search
MLELIKKKISETHGSDEKQLDIIFSDADRIIVEAPAGCGKTTTLVSKIAYMIATKSFPQN
KKVLALTFSVNAAYKMKKDLADKLPEMGLLDIREPADLNRRMFISNYHGLCRRILSLYGY
LINPALKEINMFKAIGESDAKFDEFLSGEEIDLSEAQLEIVKKFGQAVSECDEETLKNSL
NQYNEILILKFIEKKVITYNGYISLTMYLLEKNKELLNFYQKLFPVVVIDEFQDTNYLSW
CFVKNLINDKTKLFFVGDPLQRIYGFIGAVPKLMDMAAYELNMVQMKLEKNYRFKDNLSM
LSLDKNIRSNALNCKAPIIYNDSIVNLHISDSHEKECEWIADNVASLLKNDSDQKTSILV
QQRGAGIDMIMEEFDQRNISYFYALFTDDDETYVSYHFDALEVFRKQIDRSRYHRVSKSV
LDRTLSEIGSYYIGSSSKVIASLIDLTQAFFEKIIGEYAFLSDDEKYTFICDTFENRALK
QNMDAIDARVFVSTVHGAKGLEWENVIIPDMEPYCFPNYYSLCGNCDFNTGRFSSGNYCK
ININNHDIDEFLEELSVFYVAVTRARKNLLFSASKSRYNNDGARKSSKVSCLLTLPGIKP
QLV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctagagctaattaaaaaaaagatttctgagacacatggaagtgatgaaaagcagctt
gatattattttttctgatgcggacagaataattgttgaggctcctgcgggatgtggaaaa
actacaacacttgtcagcaaaatagcatatatgattgctactaaatcatttcctcaaaac
aaaaaggttttggcgcttacattcagcgtaaatgcagcttataaaatgaaaaaagatctg
gctgataaacttccggagatgggattattagatattcgcgaaccggcagatttaaaccga
agaatgtttatttcgaattatcatggtttgtgtagacgaattttatcgttatacggttat
ctaataaatcctgctttaaaggaaataaatatgtttaaggcaattggagaatcggatgct
aaatttgatgaatttttatccggagaagagattgatttatctgaagctcaattggaaatc
gtaaaaaaatttggacaggctgtttctgaatgtgatgaagaaacgttaaaaaacagttta
aatcagtataatgaaatattgattttgaagtttattgagaaaaaagtcataacatataat
ggttatatttcattgacaatgtatttacttgaaaagaacaaagaattactgaatttttat
caaaaactctttcccgttgttgtcatagatgagtttcaggataccaattatttaagctgg
tgttttgttaaaaatcttataaacgataaaacaaaattatttttcgtgggcgatccgctt
caaagaatatatggctttattggggccgttcctaagttgatggatatggcggcttatgag
ttgaatatggtgcagatgaagttggagaagaattataggtttaaagataatttgagcatg
ttgagtttagacaaaaatattagatctaatgctttgaattgtaaggctccaataatttat
aatgattcaattgtaaatcttcatatatcagattcgcacgaaaaagaatgtgaatggata
gcagataatgtagcaagtttattaaaaaatgacagtgatcagaaaacgtctatattagtt
caacaacgcggagcaggtatagacatgataatggaggaatttgatcaacgcaatatatcg
tatttctatgcactttttacagatgacgatgaaacttatgtgtcgtatcattttgatgca
cttgaagtttttcgaaaacaaattgatagaagtcgttaccatagggtgtcaaagagtgta
ttagatagaactttatcagagataggttcctactatattggtagttcatctaaagtgatt
gcatcattgatagatctgacacaggctttttttgaaaaaatcataggagagtatgcgttt
ttaagcgatgatgaaaaatatacatttatttgtgatacttttgaaaaccgcgcattaaaa
cagaacatggatgcaattgacgctagagtatttgtgtctactgttcatggagctaagggg
cttgaatgggaaaatgtaattattccagatatggaaccttattgctttccaaactattat
tcgctgtgcggaaattgtgattttaatactggaaggttttcttcgggaaattattgcaaa
atcaatataaacaatcatgatatagatgagttcctagaggagctaagcgttttttatgtt
gcggttactagagctcgaaagaatctactcttttctgcttcaaagagtagatataataat
gatggtgcaagaaaaagctcaaaagtcagttgcttattgacacttcctgggataaaaccg
caattggtttga
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