Bordetella pertussis CS: BPTD_1215
Help
Entry
BPTD_1215 CDS
T01846
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bpc
Bordetella pertussis CS
Brite
KEGG Orthology (KO) [BR:
bpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpc03021
]
BPTD_1215
Transcription machinery [BR:
bpc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPTD_1215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_30
HTH_10
GerE
HTH_AsnC-type
Sigma70_ECF
HTH_29
HTH_11
HTH_Crp_2
Peptidase_M78
HTH_3
HTH_DeoR
HTH_17
HTH_28
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AEE66617
LinkDB
All DBs
Position
complement(1312323..1312901)
Genome browser
AA seq
192 aa
AA seq
DB search
MDTASAADEALMLAYGAEGDMDAFDALYARHRAGLYRYILRSARNAAQADDIFQETWSRV
IDARARYRPQARFTTWLLQIAHNLLVDAHRRQPAPVAPEQAEAALASVPAAEHEQPEARL
SEFQQRRRLQLAIERLPDEQRLAMLLRLEHDLDVEEIAQVTGVSRETVKSRLRYATRRIR
EELSSESAPRSP
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcgagcgccgccgacgaagccttgatgctggcctacggggccgaaggcgac
atggacgccttcgacgccctgtacgcccgccaccgcgccggcctgtaccgctacatcctg
cgcagtgcgcgcaacgccgcccaggccgacgacatcttccaggaaacctggagccgcgtc
atcgacgcccgggcccgctaccgcccccaggcgcgctttaccacctggctgctgcagatc
gcgcacaacctgctggtcgatgcccatcgccgccagcccgccccggtcgccccggaacag
gccgaggccgcgctggccagcgtgcccgccgccgaacacgagcagcccgaggcgcggcta
tccgagttccagcagcgccgccggctgcaactggccatcgagcgcctgccggatgaacaa
agactggcaatgctgctgcgactggagcacgatctggatgtggaagaaattgcgcaagtc
accggtgtctctcgcgaaaccgtcaaatcgcgcctgcgctacgccacccggcgcatccgc
gaggagctgagctccgagagcgcccccaggagcccctag
DBGET
integrated database retrieval system