Bordetella pseudohinzii: BBN53_14010
Help
Entry
BBN53_14010 CDS
T04945
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bpdz
Bordetella pseudohinzii
Pathway
bpdz03030
DNA replication
bpdz03430
Mismatch repair
bpdz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpdz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBN53_14010
03430 Mismatch repair
BBN53_14010
03440 Homologous recombination
BBN53_14010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpdz03032
]
BBN53_14010
03400 DNA repair and recombination proteins [BR:
bpdz03400
]
BBN53_14010
Enzymes [BR:
bpdz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBN53_14010
DNA replication proteins [BR:
bpdz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBN53_14010
DNA repair and recombination proteins [BR:
bpdz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBN53_14010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
DNA_pol3_tau_5
AAA_16
AAA_2
AAA_14
AAA_18
AAA_5
TsaE
nSTAND3
AAA_30
AAA_19
PIF1
RsgA_GTPase
AAA_28
Rad17
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ANY16897
LinkDB
All DBs
Position
complement(3096953..3098923)
Genome browser
AA seq
656 aa
AA seq
DB search
MTYLVLARKWRPRSFDTLVGQDHVVRALTHALDTQRLHHAWLFTGTRGVGKTTLSRILAK
SLNCETGITSKPCGVCRACTEIDAGRFVDYLELDAASNRGVEEMTQLLEQAVYAPGAGRF
KVYMIDEVHMLTGHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPP
ESIVGHLQAVLGEEAIGFEVPALRLIGQAASGSMRDALSLTDQAIAYSAGNLTEDAVRGM
LGTIDQRHLVRLLDALAAGDARGVLAVADELATRGLSYAGALADFAVLLSRIAIEQRVAG
VTPADDPLAQDIARLAASLHPDAVQLFYSVAVHSRGELTLAPDEYAGFVMACLRMLALNG
EAGPATQAEAPRVAAAQAAPAAAPAAAKPPVAPEPAAEPAPEPRPPAAALARTVPATATP
VPPWEDSPEQTAQAAIAKASALAEPVRPAADEPPPAPSAKPAAAPQDDGPPAWVDEAIPD
DAEEAGAQAYMQDPDDEFETLAAEPAPVARAMPEPRAPRQPRARLTDMSAQNWPELAARL
PVTGLAAELARQSEWAGVQGDAVTLRVAVRTLAESESRVRLQTVLCEHFAQSLRLEIEVG
VTGDATAHAVARIERAARQQAAEEAVAVDPFVQALINDFGGHVVPNSVRAVEPPAA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgacttatctggttctggcccgcaagtggcgtccgcgatcctttgataccctggttggc
caggatcatgtcgtgcgcgcattgacgcacgccctggatacccagcgcctgcaccacgcc
tggctgttcaccggcacgcgcggggtgggcaagaccacgctgtcgcgcatcctcgccaaa
tccctgaattgcgaaaccggcatcacctccaagccttgcggcgtctgccgcgcctgcacg
gagatcgatgccggccgctttgtcgattacctcgagcttgacgcggcctccaaccgcggc
gtcgaggaaatgacccagttgctggagcaggcggtctatgcgccgggcgccggccgcttc
aaggtctatatgatcgacgaagtccacatgctcaccggccacgctttcaacgccatgctg
aagacgctggaagagccgccgccccacgtcaagttcatcctggcgacgaccgatccgcag
aaaattcccgtcaccgtgctgtcgcgctgcctgcagttcaacctcaagcagatgccgccc
gagtccatcgtcggccatctgcaggcggtgctgggcgaggaagccatcggcttcgaggtg
ccggccctgcgcctgatcggccaggccgcctcgggttcgatgcgcgatgcgctgtccctg
acggaccaggccattgcctacagcgccggcaacctgaccgaagacgccgtgcgcggcatg
ttgggcaccatcgaccagcgccacctggtgcggctgctggatgcgctggccgccggcgac
gcgcgcggcgtgctggcggtggccgacgagctcgccacccgtggcctgtcgtatgccggc
gcgctggccgacttcgctgtcctgctctcgcgcatcgcgatcgagcaacgggtcgccggc
gtcacgcccgcggacgacccgctggcccaggacatcgcgcgcctggcggccagcctgcat
ccggacgccgtgcagctgttctattccgttgccgtgcacagccgcggcgaactcaccctg
gccccggacgaatacgccggctttgtcatggcctgcctgcgcatgctggcgctcaatggc
gaagcgggcccggcgacccaggccgaagcgccgcgcgtcgcggcggcccaggccgcgccc
gccgcggcgcccgccgccgccaagccgcctgtggcgcccgagcctgcggccgagcccgcg
cccgagccccgcccgccggcggccgccctggcgcgcacggtcccggccaccgcgacgccc
gtgccgccctgggaagacagccccgaacaaaccgcccaggccgccatcgccaaggccagc
gccttggccgagccggtccggccggcggcggacgagccgccgccggcgcccagcgccaag
ccggcggccgccccgcaagacgacgggccgcccgcctgggtcgacgaagccattcccgac
gatgccgaagaggcgggcgcccaagcctatatgcaggatccggacgacgagttcgagacc
ttggccgccgagcccgcgcccgtggcgcgcgccatgcccgagcctcgcgcgccgcgccag
ccgcgcgcgcgcctgaccgatatgtcggcccagaactggccggagctggccgcgcgcctg
cccgtcaccgggctggccgccgaactggcccgccagagcgaatgggccggcgtccagggc
gatgccgtgacgctgcgcgttgccgtgcgcacgctggccgagagcgaaagccgcgtgcgc
ctgcagacggtgctgtgcgagcatttcgcccagagcctgcgcctggagatcgaagtgggc
gtgacgggcgacgccaccgcccacgcggtggcgcgcatcgagcgcgccgcgcgccagcag
gcggccgaggaggccgtcgccgtcgatcccttcgtgcaggcgctgatcaatgattttggc
gggcatgtcgtgccgaactcggtgcgcgccgtcgagccgccagccgcctga
DBGET
integrated database retrieval system
