Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163624
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Entry
110163624 CDS
T05002
Symbol
ddx41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
110163624 (ddx41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpec03041
]
110163624 (ddx41)
Enzymes [BR:
bpec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110163624 (ddx41)
Spliceosome [BR:
bpec03041
]
Complex C
Other components
Complex C specific factors
110163624 (ddx41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
UTP25
SecA_DEAD
AAA_22
Toprim
Motif
Other DBs
NCBI-GeneID:
110163624
NCBI-ProteinID:
XP_020784282
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MEAETRLQKRPIGEEERGSDGSEDDDYVPYVPVKIRKQQMLQKLQRIRGKVVDEEQKESG
EEQRDEEEGLGPRSNVSLLDQHQVLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSV
KEMAKGIIYDDPIKTSWTAPRYILNMPETRHERVRRKFHILVDGDGIPPPIKSFREMKFP
PAILKGLKKKGIIHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFALEQEKR
LPFFKREGPYGLIICPSRELARQTHGIIEYYCKLLEEEGAPPMRTALCIGGMSVKEQMEV
IKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQR
QTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQ
KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVAT
DVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMDLK
ALLVEAKQKVPPVLQVLQMGDETMLDIGGERGCTFCGGLGHRITDCPKLEAMQTKQVTNI
GRKDYLAHSSMDF
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagactcgtcttcaaaagcggcccattggagaagaggagaggggctctgac
ggatcagaggatgatgactacgtcccatatgtccctgtcaaaatccgaaaacaacaaatg
ctccaaaaattgcagcgtattagagggaaggtagtggatgaggagcagaaagaaagtggc
gaggaacaaagagatgaagaagagggacttggtccacgctccaatgtcagtcttttggac
cagcaccaagtccttaaggaaaaggctgaagctcgtaaggagtctgccaaagaaaaacaa
ctcaaagaggaggaaaagattctggaaagtgttgcagagggcagagctttaatgtctgtg
aaagaaatggccaaaggtatcatatatgatgaccctattaaaaccagctggactgctccc
cgttatatcttgaacatgccagaaacaagacatgagcgagttagaagaaaatttcacatt
ctagttgatggtgatggcattccacctccaatcaaaagtttcagggaaatgaaatttcca
ccagcaatacttaaaggcttgaaaaagaaaggcattatacatccaacccccattcagata
caaggaattcccactgttctttctggacgggatatgattggcattgcttttaccggttct
ggaaagacattggtcttcactctgccgattatcatgtttgccttggagcaggaaaaacga
ctacctttctttaaacgtgaaggaccttatggccttatcatctgtccatcaagggagttg
gcaagacaaacacatggcattattgaatattactgcaaactgttagaagaagaaggcgct
ccaccaatgcgcactgccctctgtattggcggcatgtctgttaaggaacagatggaagta
ataaaacatggtgtccatatgatggtggcaactcctggtagactcatggacttactgcag
aagaagatggtcagtttggatatatgccgctacctggctctggatgaggctgataggatg
attgacatgggcttcgaggaggacattcgaaccattttctcctatttcaagggacaaagg
caaaccctcctttttagtgctactatgccaaagaagatacaaaacttcgccaagagtgca
cttgtcaaaccaataactattaatgtgggccgggcaggtgccgccagcttggatgtcatt
caggaagtggaatatgtcaaagaggaggccaagatggtgtacttactggagtgtctacag
aaaacgccaccacctgttttgatatttgctgagaaaaaggctgatgttgatgctattcat
gagtatcttttgctgaaaggtgtagaggctgtggccattcatggaggcaaagaccaagag
gaaagaacaaaagccatagaagcatttaaagaagggaaaaaagacgtgttggttgctaca
gatgttgcctccaagggtttggatttccctgctatacaacatgtagtaaactatgacatg
cccgaggagattgaaaactatgttcatagaattggaagaacgggtcgctcaggaaaaact
ggtattgctacaacgttcatcaataaaggctgtgatgagtctgtgctgatggacctgaaa
gcgctgctggttgaagccaaacagaaggttcctccagtccttcaggtgctacagatgggt
gacgagactatgttggacattggaggcgaaagaggctgtacattctgtggtggtctgggc
catcgtatcactgactgtcccaaactggaggctatgcagaccaagcaggtcaccaacatt
ggccgcaaggactacttggcccacagctcaatggacttttaa
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integrated database retrieval system