KEGG   Bathycoccus prasinos: Bathy07g03970
Entry
Bathy07g03970     CDS       T03089                                 
Name
(RefSeq) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bpg  Bathycoccus prasinos
Pathway
bpg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bpg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Bathy07g03970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpg03400]
    Bathy07g03970
Enzymes [BR:bpg01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Bathy07g03970
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Bathy07g03970
DNA repair and recombination proteins [BR:bpg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Bathy07g03970
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH Fpg-like_C NFACT_N
Other DBs
NCBI-GeneID: 19014886
NCBI-ProteinID: XP_007512322
UniProt: K8F2X7
LinkDB
Position
7:784316..785401
AA seq 361 aa
MPELPEVEHARKLVHAHCVNKICTNVIFPSAETGVLDEKCFKDIGEEMFKKAVLNKRLLN
THRKGKQGWLEFEGESFVLFHFGMTGAFSVKGERPLKYVEFKVDQESWPPKFYKFVLEFS
GGEKCLAYTDPRRFGRVQVRNECPRKSAPVNKLGFDPYLERISETEFEKIFRRRNAAIKS
VLLDQSVACGVGNWMADEMLYRAKIHPEVKASELNGEAMRSLREAMFDVTRVAVESDADS
GRFPSDWLFHHRWGKNQNAKMANGEKISFCEVGGRTTAFVAARQKKVANTTSGSNGADPK
EAKKKTTTKVKREEEPVSAKKEIAKRSKKASGGGGGGGGATANLAARVTRSAIKSAYFLL
R
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgccggaactcccggaggtggaacacgcgcgtaaactcgtccacgcgcactgcgtgaac
aaaatctgcacgaacgtcatcttcccgtccgctgaaaccggcgttttggacgagaaatgt
ttcaaagatatcggggaggaaatgttcaagaaagcagtcctgaacaaacgcttactcaac
acgcacaggaaaggcaaacaaggatggctcgaattcgaaggcgagtcgttcgttttgttc
cacttcgggatgaccggggcgttctcggtgaaaggcgaaaggccgttaaagtacgtggag
tttaaagtcgaccaggaaagttggccgccaaagttttataagtttgtgttggagttttcg
ggaggagagaagtgcttggcgtataccgacccgagacggtttggacgagtgcaagtgaga
aacgagtgtccgaggaaatcggcaccggtgaataagcttggatttgatccgtatttagaa
aggatttcggagacggagtttgagaagatttttaggagacgcaacgcggcgattaagagc
gttttgttggatcaaagcgtcgcgtgcggggtcgggaactggatggcggacgagatgttg
tatcgagcgaaaattcatccggaggtgaaagcgagcgagttgaatggagaggcgatgcgg
agtttgcgggaggcgatgtttgacgtgacgagagtggcggtggaaagcgacgcggattcc
ggacggtttccgagcgattggttgtttcatcaccggtgggggaagaatcaaaacgcgaag
atggcgaacggggagaagattagcttttgcgaagttggcgggagaacgaccgcgtttgtg
gcggcgaggcagaagaaggtagcgaatactacgagtggcagcaacggcgcggatccgaag
gaggcgaagaagaagacgacgacgaaagtgaagagggaagaggaaccggtatcggcgaag
aaagaaatcgccaagcgctcgaagaaggcaagcggcggcggcggtggtggtggtggtgca
actgcgaacctcgcggccagagtcacgaggagtgccattaagagtgcttactttttgctc
agataa

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