Paraburkholderia phymatum: Bphy_3005
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Entry
Bphy_3005 CDS
T00704
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00260
Glycine, serine and threonine metabolism
bph00630
Glyoxylate and dicarboxylate metabolism
bph00785
Lipoic acid metabolism
bph01100
Metabolic pathways
bph01110
Biosynthesis of secondary metabolites
bph01200
Carbon metabolism
Module
bph_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Bphy_3005
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Bphy_3005
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Bphy_3005
Enzymes [BR:
bph01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Bphy_3005
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ACC72175
UniProt:
B2JJ73
LinkDB
All DBs
Position
1:3369129..3372059
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AA seq
976 aa
AA seq
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MKLEHPDRLMNRTPLSLAALEVHDAFAERHIGPDGADQQSMLEALGFASRAALMDAVIPQ
AIRRQDALPLGPFGQPKSEAEALAALRELADKNQVFRSYIGQGYYNAHTPAVILRNVLEN
PAWYTAYTPYQPEISQGRLEALLNFQQMIVDLTGLAISNASLLDEATAAAEAMTLLQRVG
KPKSNIFYVADDVLPQTIEVVKTRALPVGIEVKVGPAAQAATSNAFGVLLQYPGVNGDVR
DYRALADAVHAAGGHVVAAADLLALTVLTPPGEWGADVAVGNSQRFGVPVGFGGPHAAYL
AVRDEFKRQMPGRLVGVTVDAQGNSALRLALQTREQHIRREKATSNVCTAQALLAIMASM
YAVYHGPRGLKTIAQRVNRIAALLAQGAKQLGYTLVNETFFDTLTFETGPRTQALHDAAT
AKRINLRRVSETRVGLSIDETTTRADLADLLAAFAQAAFVDAAPQIDELDAQLGQSNTFP
ATLERQSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLP
VTWPEFGQIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIH
AYHESRAEGHRNVCLIPASAHGTNPASAQMAGMQVVVVACDAQGNVDIEDLKKKAAQHAE
KLAAIMITYPSTHGVFEQNVREVCEIVHAHGGQVYVDGANMNAMVGLAAPGQFGGDVSHL
NLHKTFCIPHGGGGPGVGPVAVGAHLAKFLPNQTSTGYERDVNGIGAVSAAPYGSASILP
ISWMYIAMMGAKNLTAATETAILNANYVANKLAPHYPVLYSGPGGLVAHECILDLRPIKE
TSGISVDDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKEELDRFIEAMIAIRNEIRD
VEEGRSDREDNPLKHAPHTAAVVVANEWKHGYTRETAAYPLPTLVAKKYWPPVGRADNAY
GDRNLFCSCVPVADYE
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgaacacccggatcgtctgatgaaccgcactcctctctcgctcgccgcgctc
gaagtgcacgacgccttcgccgaacggcatatcggccccgatggcgccgatcagcagtcg
atgctcgaagccctcggcttcgcatcgcgcgccgcgttgatggacgcggtgattccgcag
gcgatccgccgccaggatgcgctgccgctcggcccgttcggccagccgaagagcgaagcc
gaagcgctcgccgcgctgcgcgaactcgcggacaagaaccaggtgttccgctcgtacatc
ggccagggctactacaacgcgcatacgcccgccgtcatcctgcgcaacgtgctcgaaaac
ccggcctggtacacggcgtatacgccgtatcagccggaaatttcgcaaggccgactcgaa
gcgctgctgaactttcagcagatgatcgtcgacctgacaggcctcgcgatctccaacgct
tcgctgctcgacgaagcaacggccgccgccgaagcgatgacgctgctgcaacgcgtcggc
aagccgaagtcgaatatcttctacgtggcagacgacgtgctgccgcaaaccatcgaagtc
gtgaagacacgggcgctgcccgtcggcatcgaagtgaaggtcggtccggctgcgcaagcg
gcgacgtcgaacgctttcggcgtgctgttgcaatatccgggcgtgaacggcgatgtgcgc
gactaccgcgcgctcgctgacgcggttcacgccgcgggcggccacgtggtcgccgccgcc
gacctgctcgcgctgaccgtgctcacgccgccgggcgagtggggcgcggacgtggccgtc
ggcaactcgcagcgcttcggggtgcccgtcggcttcggcggcccgcacgctgcctatctc
gccgtgcgcgacgaattcaagcgtcagatgccgggccgtctcgtcggcgtcaccgtcgat
gcgcaaggcaactccgcgctgcgtctcgcactgcaaacgcgcgaacagcacatccgccgc
gaaaaggcgacgtcgaacgtgtgtacggcgcaggcgctgctcgcaatcatggccagcatg
tacgccgtttatcacggcccgcgcggcctgaagacgatcgcgcagcgcgtgaaccgcatt
gccgcgctgctcgcgcaaggcgcgaagcagctcggctatacgctcgtcaacgagaccttc
ttcgacaccctcacgttcgaaacgggtccgcgcacgcaggcgctgcacgacgccgcgacg
gcgaagcgcatcaacctgcgtcgcgtgagcgaaacgcgcgtcggcctgtcgatcgacgaa
acgacgacgcgcgccgacctcgccgatctgctcgccgctttcgcgcaagctgcgtttgtc
gacgcggcgccgcaaatcgacgaactcgatgcgcagctcggccagtcgaacacgttcccg
gcgacgctcgaacgccaaagcgcgtacctgacgcatcacgtgttcaaccgtcaccattcg
gaaacggaaatgctgcgctatctgcgcagcctctcggacaaggatctcgcgctcgaccgc
tcgatgatcccgctcggctcgtgcacgatgaagctgaacgcgacgtcggaaatgctgccc
gtcacgtggcccgagttcggccagattcatccgtttgcgcccgccgagcaaaccgtcggc
taccgcgaaatgatcgaccagctcgaacagatgctggtcgccgcaaccggttacgcggcc
gtgtcgctgcagccgaatgccggctcgcaaggcgagtacgccggcctgttgatcattcac
gcctatcacgagtcgcgcgccgagggtcatcgcaatgtgtgcctgattcccgcttcggcg
cacggcacgaacccggcatcggcgcagatggcgggcatgcaggtcgtcgtcgtcgcgtgc
gatgcgcaaggcaacgtcgatatcgaagacctgaagaagaaggccgcgcagcacgcggaa
aaacttgcggcgatcatgatcacgtacccgtcgacgcacggcgtgttcgagcagaacgtc
cgcgaagtctgcgagatcgtgcatgcgcacggcggccaggtgtatgtggacggcgcgaac
atgaacgcgatggtgggtctcgcggcgcccggccagttcggcggcgacgtctcgcacctc
aacctgcacaagacgttctgcattccgcacggcggcggcgggccgggtgtcggccctgtc
gctgtcggcgcgcatctggcgaagttcctgcccaatcagacgtcgacgggctatgagcgc
gatgtgaacggcatcggcgccgtttccgctgcgccgtacggatcggcgtcgatcctgccg
atctcgtggatgtacatcgcgatgatgggcgcaaagaacctgacggccgcgaccgagacc
gcgatcctcaacgcgaactacgtcgcgaacaagctcgcgccgcattacccggtgctgtac
tcgggcccgggcggactcgtcgcgcacgagtgcattctcgatctgcgtcccatcaaggaa
acgagcggcatttcggtggacgacgtcgcgaagcgtctgatggactacggcttccacgcg
ccgacgatgagcttccccgtgccgggcacgctgatggtcgagccgaccgaatcggaatcg
aaggaagagctggatcgtttcattgaagcgatgatcgcgattcgcaacgaaatccgcgac
gtcgaggaaggccgcagcgaccgcgaggacaatccgctgaagcacgcgccgcacacggcg
gccgtcgtcgtcgcgaacgaatggaagcatggctatacgcgcgaaacggcggcgtatccg
ctgcccaccctcgtcgcgaagaaatactggccgcccgtcggccgtgccgacaacgcgtat
ggcgaccgcaatctgttctgctcgtgcgtgcccgtagccgattacgagtaa
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