Burkholderia pseudomallei NCTC 13179: BBK_4988
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Entry
BBK_4988 CDS
T02894
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bpk
Burkholderia pseudomallei NCTC 13179
Pathway
bpk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BBK_4988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpk03400
]
BBK_4988
DNA repair and recombination proteins [BR:
bpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BBK_4988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AGZ32073
LinkDB
All DBs
Position
2:complement(1827984..1829081)
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AA seq
365 aa
AA seq
DB search
MARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPRED
IVRGYEYEKERYVILTDEEIRAANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGE
KVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLALDTLRWQDELRPLAEIDAPA
ADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRDDILALVDRKVREGRVEEIAQED
TAPARRTADIVDLTELLKRSLGRAKGPRRAPDGGANERGDSGEGGEGGGRGGGELARELE
RSVGGTRGGRGGGRKKAEPHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAKKPAAAR
KRRAA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatgatctggaaaggcgcgatcagcttcgggctcgtgcacgtgccggtgcag
ctgtatccggccacgcgcaccgtgaagccttcgtttcgcctgctcgacaagcgttcgctc
gatccggtcggctatcggcagatcaacaagcgaaccggcaaggccgtgccgcgcgaggac
atcgtgcgcggctacgagtacgagaaggaacgttacgtgatcctgaccgacgaggagatt
cgcgcggcgaatccggaatcgacgcagacggtcgacatcctgacgttcgtcgacgatgag
gcggtgtcgttcctctatctcgacacgccgtactacctcgtgcccgatcgcggcggcgag
aaggtctacgcgctgctgcgcgacgcgctgaagcgctcgggcaagatcggcatcgcgctc
gtcgtgatgcgcgaccggcagcatctgggcgcggtgattccggtcgggccgctgctcgcg
ctcgacacgctgcgctggcaggatgaactgcggccgctcgcggagatcgacgcgcccgcc
gccgacgcgaagaaggcgggcgtgagcgcgcgcgagttcgagatggcggcgaagctgatc
gacgatatgtccggcgactggtcgcccgacgattatcacgacacgttccgcgacgacatc
ctcgcgctcgtcgacaggaaggtgcgcgaagggcgggtcgaggaaattgcgcaggaggac
acggcgccggcgcggcgcaccgcggacatcgtcgatctgaccgagctgctcaagcgcagc
ctcggccgcgcgaaggggccgaggcgcgcaccggacggcggcgcgaacgaacgcggcgac
agcggcgaaggcggcgaaggcggcggacgaggcggcggcgaactcgcgcgcgagctcgag
cgaagcgtcggcggaacgcgcggcgggcgtggcggcggccgcaagaaggccgagccgcat
gcgccgccgcgcaagcgcgcgcaggcggccgcgacgaagcgggggaaacaggcgaagccg
cgcgacggcgcgtcgcgcgcgtcggcgcgcacggccgcgaagaagcccgccgccgcgcgc
aagcggcgcgccgcctga
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