KEGG   Burkholderia pseudomallei NAU35A-3: BBU_4758
Entry
BBU_4758          CDS       T03476                                 
Name
(GenBank) DEAD/H associated family protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bpsa  Burkholderia pseudomallei NAU35A-3
Brite
KEGG Orthology (KO) [BR:bpsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpsa03400]
    BBU_4758
Enzymes [BR:bpsa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BBU_4758
    5.6.2.6  RNA 3'-5' helicase
     BBU_4758
DNA repair and recombination proteins [BR:bpsa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BBU_4758
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C Lhr_WH ResIII DprA_WH MarR_2 HTH_IclR
Other DBs
NCBI-ProteinID: AIS89986
LinkDB
Position
2:complement(1684404..1689218)
AA seq 1604 aa
MHATPARPAAGALDAFHPVVAAWFSDTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTL
TAFLSALDDLVRDALAHDGALPDETLVVYVSPLKALSNDIHVNLEAPLAGIAAEIARRGL
PVPQIRTAVRTGDTTQAERVAHRKHAPHILVTTPESLYVLLSSESGRRMLASTRTVIVDE
IHALANAKRGSHLALSLERLDALVGRKLPRIGLSATQKPVEAVARFLVGGRDDAPLDCAI
VDTGHTRTRDLALELPPVPLGPVMANDVWERLYDRIAELAAAHRTTLVFVNTRRMAERAA
RHLADRLGANAIAAHHGSLAKEHRFDAEQRLKHGKLKLLVATASLELGIDIGDVELVCQL
GSPRGIAPFLQRVGRSGHHIGGVPKGRLFPLSRDELVECAALLDCVRRGELDVLRIPRAP
LDVLAQQLVAEVACREWDEHALYRCVTQAAPYATLARETFDEVLKMLAEGFTSRRGARAA
YLHRDVVAHTVRGRRGARLAAVTSGGTIPDNADYAVLLEPQGVNIGTVNEDFAVESLAGD
VFQLGNQSYRIIRIETGRVRVEDAHGQAPNIPFWLGEAPARSDELSAGVARLRARLDALL
AHGDAAGAGAALPVNAASAPAPEREAAAAGQGARARAAAPHGTPALARRALPAALPAAPP
AVCARAAPSAAAPSAAAPSTAAPSTAIPSAAAPTVAAMPVPPEAELRAEPRRLAPALAWL
TGELGLDAEAARQIADYLARARAALGALPTQDTLVMERFFDESGGMQLVIHSPYGSRINR
AWGLALRKRFCRSFNFELQAAATDDALILSLSHAHSFALDEVWRYLRASSAEHVLIQALL
DAPLFATRWRWNATTSLALPRFAGGRKVAPQLQRMKSEDLLATVFPDQVACAENIVGERE
VPKHPLVDQTLDDCLHDAMDTEGWLALLRRIEAGDVALVARDLPAPSPLAAEILNAKPYA
FLDDAPLEERRTQAVLARRWSDPESADDLGALDAGAIEAVRDEAWPLVREPDEMHDALVG
LACIADDEIASHDGWRACVAQLAAGGRAARLALAGGRGLWIAAERVASMRALYGADVALD
PPLAPPPGFDAPWEPEAALVDVIRARLTGFGPVTAAALAAPLALPAASVAIALAALEREG
YVMRGRFTPGARDDEWCERHLLARIHRYTVKRLRREIEPVELADFMRFLFHWQRVAPDTR
GLGGDALAAVVHQLEGFEAAASAWEDEILPARLADYVAGGLDEPCRAGKLTWTRLGAPAK
AASAPVKTTPVALLPRRELAIWQALRDPAAQPALSARAERVRATLAAYGAMFFDELAAHA
RLLPVELERALGELVAAGLVNADSFAGLRALLRPAAQRPSRARRGGALIGGMDDAGRWAL
VQRLPLAPLDFGEGGSEDEAANDDDAPSGDGTPGAGPEAARRGGVREGGAEADARIARAM
RAAPPQAGRHAIAPAALEHVARTLLRRYGVAFWRLLACEAEWMPSWRELLPVYRRLEARG
EIRGGRFVAGLAGEQFALPDAIPILRELRRRPAEGLMLCVSGADPLNLTGTLLPGERVPA
LAGNRILFRDGVPIASLVGGQFAFARELDALAQDRARARLARHR
NT seq 4815 nt   +upstreamnt  +downstreamnt
atgcacgccactcccgcccgccctgccgccggcgcgctcgacgcgttccaccccgtcgtc
gccgcctggttctccgacacgttcgccgcgcccaccggcgcgcaagcgctcgcgtggccg
cacatcaaggccggccgctcgacgctcgtcgccgcgccgacgggctccggcaagacgctc
accgcattcctgtccgcgctcgacgatctcgtgcgcgacgcgctcgcgcatgatggcgcg
ctacccgacgagacgctcgtcgtctacgtgtcgccgctgaaagcgctgtcgaacgacatt
cacgtgaacctcgaagcgccgctcgccggcatcgccgccgaaatcgcgcggcgcgggctg
ccggtgccgcaaatccgcaccgccgtgcgcaccggcgacacgacccaggccgagcgcgtc
gcgcatcgcaagcacgcgccgcacattctcgtcacgaccccggaatcgctgtacgtgctg
ctgtcgtccgaatcgggccggcgcatgctcgcgagcacgcgcaccgtgatcgtcgacgaa
atccacgcgctcgcgaacgccaagcgcggcagccatctcgcgctgtcgctcgagcggctc
gacgcgctcgtcggccgcaagctgccgcgcatcgggctgtccgcgacgcaaaagccggtc
gaggcggtcgcgcgctttctcgtcggcggccgcgacgacgcgccgctcgattgcgcgatc
gtcgacaccggccacacgcgcacgcgcgatctcgcgctggaattgccgcccgtgccgctc
gggcccgtgatggcgaacgacgtgtgggagcgcctctacgatcgcatcgcggagctggcc
gccgcgcaccgcacgacgctcgtgttcgtcaacacgcgccggatggccgagcgcgcggcc
cgccatctggcggacaggctcggcgcgaacgcgatcgccgcgcaccacggcagcctcgcg
aaggaacatcgcttcgacgccgagcagcgcctgaaacacggcaaactcaagctgctcgtc
gccacggcctcgctcgagctcggcatcgacatcggcgacgtcgagctcgtctgccagctc
ggctcgccgcgcggcatcgcgccgttcctgcagcgcgtcgggcgctccgggcaccatatc
ggcggcgtgccgaaggggcggctctttccgctgtcgcgcgacgaactcgtcgaatgcgcg
gcgctcctcgattgcgtgcggcgcggcgagctcgacgtgctgcgcattccgcgcgcgccg
ctcgacgtgctcgcgcagcagctcgtcgccgaagtcgcctgccgcgaatgggacgagcac
gcgctctatcgctgcgtgacgcaggccgcgccctacgcgacgctcgcgcgcgagacgttc
gacgaggtgctgaagatgctcgccgagggcttcacgagccggcgcggcgcgcgcgccgcg
tacctgcaccgcgacgtcgtcgcgcacacggtgcgcgggcggcgcggcgcgcggctcgcg
gccgtcacctcgggcggcacgattcccgataacgccgactacgcggtgctgctcgagccg
cagggcgtgaacatcggcaccgtcaacgaggatttcgcggtcgaaagcctcgcgggcgac
gtgttccagctcggcaaccagtcgtaccggatcatccggatcgagacggggcgcgtgcgc
gtcgaggatgcgcacgggcaggcgccgaacatcccgttctggctcggcgaggcgcccgcg
cgcagcgacgagctgtcggcgggcgtcgcgcggctgcgtgcgcggctcgacgcgctgctc
gcgcacggcgatgcggccggcgcgggtgcggccttgccggtgaacgccgcatccgcgccg
gcgcccgagcgcgaagcggccgcggccggccaaggcgcgcgtgcgcgcgccgccgcgccg
cacggcacgcccgccctcgcgcgccgcgctttgcccgctgcgctgccagccgcaccgccc
gccgtctgcgcgcgcgccgccccatccgccgccgccccatccgccgccgccccgtctacc
gccgccccgtctaccgccatcccgtccgccgccgcgccgaccgtcgccgcgatgccggtc
ccccccgaggcggaactccgcgccgagccgcgccgcctcgcgcccgcgctcgcgtggctc
acgggcgagctcggcctcgatgccgaagccgcgcggcagatcgccgattacctcgcgcgc
gcccgcgcggcgctcggcgcgctgccgacgcaggacacgctcgtgatggagcgcttcttc
gacgaatcgggcggcatgcagctcgtgatccattcgccgtatggctcccggatcaaccgc
gcgtggggcctcgcgctgcgcaagcgcttctgccgcagcttcaacttcgagctgcaggcg
gccgcgaccgacgacgcgctgatcctgtcgctgtcgcacgcgcacagcttcgcgctcgac
gaggtgtggcgctacctgcgcgcgtcgagcgccgagcacgtgctgatccaggcgctgctc
gacgcgccgctgttcgccacgcgctggcgctggaacgcgacgacgtcgctcgcgttgccg
cgcttcgccggcggccgcaaggtcgcgccgcaactgcagcggatgaagagcgaggatctg
ctcgcgacggtgttccccgatcaggtcgcgtgcgcggagaacatcgtcggcgagcgcgag
gtgccgaagcacccgctcgtcgaccagacgctcgacgactgcctgcacgacgcgatggac
accgagggctggctcgcgctgctgcggcggatcgaggcgggcgacgtcgcgctcgtcgcg
cgcgatctgcccgcgccttcgccgctcgccgccgagatcctgaacgcgaagccgtacgcg
ttcctcgacgatgcgccgctcgaggagcgccgcacgcaggcggtgctcgcgcggcgctgg
agcgacccggaatcggccgacgatctcggcgcgctcgacgcgggcgcgatcgaagcggtg
cgcgacgaggcgtggccgctcgtgcgcgagcccgacgagatgcacgatgcgctcgtcggg
ctcgcgtgcatcgccgacgacgaaatcgcgtcgcacgacggctggcgcgcgtgcgtcgcg
cagctcgcggcgggcgggcgcgcggcgcggctcgcgctcgcgggcggccgcgggctgtgg
atcgcagccgagcgcgtcgcgagcatgcgcgcgctgtacggcgcggacgtcgcgctcgac
ccgccgctcgccccgccgcccggcttcgatgcgccgtgggagcccgaggccgcgctcgtc
gacgtgatccgcgcgcgcctcacgggtttcgggccggtcacggccgccgcgctcgccgcg
ccgctcgcgctgcccgccgcgtcggtcgcgatcgcgctcgccgcgctcgagcgcgagggc
tacgtgatgcgcgggcgcttcacgccgggcgcgcgcgacgacgaatggtgcgagcggcac
ctgctcgcgcgcatccatcgctatacggtcaagcgcctgcggcgcgagatcgagcccgtc
gagctcgcggatttcatgcgcttcctgtttcattggcagcgcgtcgcgcccgacacgcgc
ggcctgggcggcgacgcgctcgcggcggtcgtccaccagctcgaaggtttcgaggcggcc
gcgagcgcgtgggaggacgaaatcctgcccgcgcggctcgccgactacgtggcgggcggc
ctcgacgagccgtgccgcgccggcaagctgacgtggacgcggctcggcgcgccggcgaag
gccgcgagcgcgccggtgaagacgacgcccgtcgcgctgttgccgcgccgcgagctcgcg
atctggcaggcgctgcgcgatccggccgcgcagccggcgctgtcggcacgcgccgaacgc
gtgcgcgcgacgctcgccgcgtacggcgcgatgttcttcgacgaactggccgcgcacgcg
cggctgctgcccgtcgagctcgaacgcgcgctcggcgagctcgtcgccgcaggcctcgtc
aacgcggacagcttcgcgggcctgcgcgcgctgctgcggccggccgcgcagcggccgtcg
cgcgcacggcgcggcggcgcgctgatcggcgggatggacgacgcggggcgctgggcgctc
gtgcagcggctgccactcgcgccgctcgattttggcgagggcggcagcgaagacgaagcc
gcaaatgatgacgatgccccgtccggcgacggcacgcccggcgccggccccgaagccgcg
cgccgcggcggcgtgcgcgaaggcggcgccgaagccgatgcccgcatcgcgcgcgcgatg
cgggccgcgccgccgcaagcgggccgccatgcgatcgcgcccgccgcgctcgagcacgtc
gcgcgcacgctgctgcgccgctacggcgtcgcgttctggcgcctcctcgcatgcgaggcc
gaatggatgccgagctggcgcgagctgctgcccgtctatcggcggctcgaggcgcgcggc
gaaatccgcggcggccgcttcgtcgcgggcctcgcgggcgaacagttcgcgctgcccgac
gcgatcccgatcctgcgcgagctccgccgccggccggccgaagggctgatgctgtgcgtg
agcggcgccgatccgctcaatctgacgggcacgctgctgcccggcgaacgcgtgcccgcg
ctcgcgggcaaccggatcctgttccgcgacggcgtgccgatcgcctcgctcgtcggcggg
cagttcgcgttcgcgcgcgaactcgacgcgctcgcgcaggaccgcgcgcgggcgcgactc
gcgcggcatcggtaa

DBGET integrated database retrieval system