Burkholderia pseudomallei MSHR511: BBQ_5897
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Entry
BBQ_5897 CDS
T03012
Name
(GenBank) pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bpsm
Burkholderia pseudomallei MSHR511
Pathway
bpsm00300
Lysine biosynthesis
bpsm00470
D-Amino acid metabolism
bpsm01100
Metabolic pathways
bpsm01110
Biosynthesis of secondary metabolites
bpsm01120
Microbial metabolism in diverse environments
bpsm01230
Biosynthesis of amino acids
Module
bpsm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpsm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBQ_5897
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBQ_5897
Enzymes [BR:
bpsm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BBQ_5897
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AHG38243
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All DBs
Position
2:3029873..3031132
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AA seq
419 aa
AA seq
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MNANLHAFTAADTAPSTEYWWARERLHYRGNALHFCGRDVAELAAAFAEPVFLYDPQRAL
DNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSPEELREALACGF
APERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIGIRVNPGVGIGY
GDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYLDAQLESFERVL
DALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGRPLALAIEPGDF
IAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCVRRPGPAQSVCV
AGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLRGQFRELALFDAAPH
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaacctccacgccttcactgccgcagacaccgcgccgagcaccgaatactgg
tgggcgcgcgagcggctgcactaccgcggcaacgcgctgcatttctgcggccgcgacgtc
gccgaactcgcggccgcgttcgccgagccggtgttcctgtacgacccgcagcgcgcgctc
gacaacgtcgcgcgcctgcaacgcgcgctcggcgacctgcaacgcggcgatttccgcctc
cattacgcgatgaaggcgaatcgctttcgcccattgctgtccgagctgcggcgctcgccg
ctcttcggcatcgacgcatgctcgcccgaggaactgcgcgaggcgctcgcatgcggtttc
gcgcccgagcggatctcgtacaccgcgcacgggatgatgccggacgaagccgcgctcctc
gccgcgctgccgggcgtgcacgtgaactgcgacacgctgagcgcgatcgcgctgctcggc
agccgctcgcccgggcgcgagatcggcattcgcgtgaacccgggcgtcggcatcggctac
ggcgacagcgagcggctgagctacgcgggcgcggcggtgacgaagttcggcatctacgcg
gagcagttcggcgcggcgctcgagctcgccgcgcggcacggcctggccgtgacatggctg
cattgccacgcgggctgcggctatctcgatgcgcagctcgaatcgttcgagcgcgtgctc
gacgcgctcgacgcgttcgccgcgcgcgtgccggggctgcgcggcatcaacctcggcggc
gggctcggactgccgcaccgcgcgacggatcggccgctcgatctcgagcgctggcgcgcg
gccgtgcacgcgcgcttcggcggccggccgctcgcgctcgcgatcgaacccggcgacttc
atcgcgaaggacgccggcatgctcgtgctgcgcgtggcatacgtcgagctcaagcgcaac
cgccgcttcgtcgggttgaacggcggcttcaatctcgcgatcgaacccgcgttctacgat
ctgccgtgcgagcccgtgccgtgcgtgcgccggccgggccccgcgcaatcggtgtgcgtc
gccggcaacatcaacgaagcgctcgacgtgtggggcaacgacgtgagcctgccgcccgtc
gagccgggcgatttcatcgcactactgaacgcgggcggctatgcgtcgtcgatgagctcg
aaccattgcctgcgcgggcagttccgcgagctcgcgctgttcgacgccgcaccgcactga
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