Bacillus pumilus SAFR-032: BPUM_0516
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Entry
BPUM_0516 CDS
T00599
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bpu
Bacillus pumilus SAFR-032
Pathway
bpu03030
DNA replication
bpu03430
Mismatch repair
bpu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPUM_0516
03430 Mismatch repair
BPUM_0516
03440 Homologous recombination
BPUM_0516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpu03032
]
BPUM_0516
03400 DNA repair and recombination proteins [BR:
bpu03400
]
BPUM_0516
Enzymes [BR:
bpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BPUM_0516
DNA replication proteins [BR:
bpu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BPUM_0516
DNA repair and recombination proteins [BR:
bpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BPUM_0516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
TIP49
AAA_30
AAA_22
AAA_16
AAA_5
DnaX_C
AAA_assoc_2
AAA_19
Rad17
DNA_pol3_delta_C
AAA_2
PIF1
AAA_24
AAA_7
Mg_chelatase
AAA_14
TsaE
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ABV61211
UniProt:
A8FAE4
LinkDB
All DBs
Position
29223..30935
Genome browser
AA seq
570 aa
AA seq
DB search
MSYQALYRVFRPQVFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK
AVNCEKSPVSEPCNECDACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY
KVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITT
KDIVGRMQKIVDAESLNVQEGSLEIIASAADGGMRDALSLLDQAISFSGEQLTIDDALLI
TGAVSQQFISQLAEAIFDQNIAVALDTLNELLQQGKDAAKLIEDMIFYFRDMLLYKTAPD
LEGVLEKVKVDENFVTLSDRVTPQFLYETIEVLNKSHQEMKWTNHPRIFFEVAVVKLCQA
TAGIPQAHANADLTTLTDKIDRLEQELSRIKAEGVPMSHSQHPQEKKEAPRPQTSNKNGY
RAPVGRIHEILKEAKRPELEKIKGKWGELLAHLKQQNKVSHAALLTDSEPVAAATHAFVL
KFKFEIHCKMVAEDKSGVRTNLEQLLESMLGKRVELVGVPDAQWGKIREEFLRDHQPDEQ
ADGQGTPAEEDPLIAEAKKLVGTDLIEIKD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtgagttatcaagctttgtatcgagtgttcagacctcaagtttttgaggatgttgttgga
caagaacacatcacaaaaacgttgcaaaatgcccttttgcagaagaagttttctcatgct
tacttattttcaggtcctagaggaacaggtaaaacaagtgctgctaaaatctttgcgaag
gcagtgaactgtgaaaagtcacctgtgagtgaaccttgtaatgaatgtgatgcttgtaaa
gggattacaaacggctcaatttcagatgtgatcgaaatagatgctgcctcaaacaacggg
gtagatgaaatccgtgatatacgtgataaagtgaaatttgctccttcggctgttacatat
aaggtttatattatagatgaagtacatatgctctctatcggggcgtttaatgcccttctt
aaaacgttagaggagccgcctgctcattgtatctttattttagctaccacagagcctcat
aagattcctcttacgatcatatctcgttgtcagagatttgattttaaacgaatcacgaca
aaagatattgttggaagaatgcagaaaattgtagatgcagaaagcctaaatgtacaagag
ggctcgctcgagattatcgctagtgcagctgatggcggtatgcgtgatgcattaagcctc
ttagatcaagccatttcgtttagtggtgagcaactgacaattgatgatgcgctgctcatt
acaggagctgtttctcagcaattcattagtcagttagccgaagcaatttttgatcaaaat
attgccgtggcgttagataccttaaatgaattacttcagcaggggaaagatgctgctaaa
ttaatagaggacatgattttttactttagagatatgctgctttataaaacagcaccagat
ctggaaggggtccttgaaaaggtaaaggtcgatgaaaatttcgtgacgctttcggatcgt
gtgacacctcaatttctatatgaaacaattgaagtgctgaataaaagtcaccaagaaatg
aagtggacgaatcatccaaggattttctttgaggtagctgttgtcaagctatgtcaggca
acggctggaataccacaagctcatgctaacgctgatttaacgacgctaacggataaaata
gacaggttggaacaggagctatctaggatcaaagctgagggtgtgccaatgtctcattct
caacatcctcaagaaaaaaaggaagcacctcgaccacaaacgagtaacaaaaatggatat
cgtgcacctgtcggccgaattcacgagattctaaaagaagcaaaacgtccagagttagaa
aaaattaaaggcaaatggggagaactccttgcccacttgaaacagcagaataaggtgtct
cacgctgcactattaacggatagtgaaccagttgctgcggctactcatgcctttgtttta
aaattcaagtttgaaatacattgtaaaatggttgctgaagataaaagcggtgttcgaact
aatcttgagcagctactagagtctatgttagggaaaagagtggaattagttggcgttcct
gacgctcaatggggtaaaataagagaagaatttttaagagatcatcagccagatgaacag
gcagatggtcaggggactcctgctgaagaggatccattgattgcagaagcaaagaagtta
gtaggaaccgatttaattgaaattaaagattaa
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