Paraburkholderia phytofirmans PsJN: Bphyt_2339
Help
Entry
Bphyt_2339 CDS
T00765
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bphyt_2339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpy03400
]
Bphyt_2339
Enzymes [BR:
bpy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bphyt_2339
DNA repair and recombination proteins [BR:
bpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bphyt_2339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ACD16738
UniProt:
B2T577
LinkDB
All DBs
Position
1:2636162..2637637
Genome browser
AA seq
491 aa
AA seq
DB search
MRSIVIEDHFVAWRAASLGALAEDLAPEAIEWRVKQESELPQGQALFDYGATSEDAEPRS
TAVRVSKELAALLQDAALFRESQRWAFLYKVLWRWHHGDRAVASPADEDGARLHRMAKSV
RRAKHDMIAYVRFRKQAPASASTVQTPEYIAWYEPEHDVLAWAAEHFSQRMGRATWMITT
PRGAAFWDGEQLHLEQRRALPGEHRCDTADEAEALWLAYYRSTFNPARLNEAALEQHMPV
RFWKGLPEGHLIPAMISEAKSGARRVAQASGVGALGGKTIPVEADMAQPAREQPSSLDTC
RRCDLWRNATQAVGSSGPSDARIMLIGEQPGDQEDLSGQPFVGPAGQLLETAITRAGLSR
EQVYLTNAVKHFKWEPRGKRRLHKTPGQREIEACSYWLERELHTVRPVVIVTLGATALTA
LLREKVSLRDHLDAPFRVEGGWGIATYHPSFALRQQTDADRDKVLAEISNALIRARELAE
SAAPTTKKQRQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccattgttatcgaagaccatttcgtcgcctggcgcgccgcctcgctcggcgct
ctggccgaagacctggcaccggaagcgattgaatggcgcgtcaagcaggaatctgagtta
ccgcaagggcaggcgctgttcgactatggcgcgacgtccgaggatgcggagcctcgctcc
actgccgtgcgtgtttcgaaagaactggcggcgctcttgcaagacgccgcgctgttccgc
gaatcacagcgctgggcgtttttgtacaaggtcctatggcgctggcaccatggtgaccgc
gcggtcgcgtcgccggcggacgaagacggcgcacgtctccatcgcatggctaaaagcgtg
cggcgcgccaagcacgacatgatcgcttacgtgcggtttcgcaagcaggcgccggcgtcg
gcatcgacggtgcagacacccgaatatatcgcctggtacgagcctgagcatgatgtgctg
gcgtgggccgcggaacacttctcgcaacgcatgggccgcgcgacctggatgatcaccacg
ccgcgcggcgcggccttctgggatggcgagcaactgcatctggagcagcgccgcgcgttg
cccggcgagcatcgttgcgataccgctgacgaagccgaggcgctatggctcgcctactac
cgcagcacgttcaatccggcgcggttgaacgaagcggcgctcgaacagcacatgccggta
cgcttctggaaaggcttgccggagggtcatctgatccctgccatgatcagtgaagcgaaa
agcggcgcgcgccgcgtagcgcaggcgagcggcgtcggcgcgctgggcggcaaaaccatt
ccggtcgaagcggacatggcgcaaccggcccgcgagcaaccctcgtcgctcgatacctgc
cggcgttgcgatctgtggcgcaatgcgacgcaagcggtcgggagttcggggccgagcgac
gcgcgcatcatgctgatcggcgagcagcccggcgaccaggaggatctgagtggtcagccg
ttcgtcgggccggcggggcaattgctggagaccgcgatcacgcgcgccggcctgtcgcgc
gagcaggtttatctcaccaacgcggtgaagcatttcaaatgggaaccgcgcggcaagcgc
aggctgcacaagacgccgggacagcgtgagatcgaagcgtgctcttactggctcgagcgg
gagttacacacagtgcgtccggtggtgattgtcacgcttggcgctaccgcgctcaccgcc
ttgctgcgcgaaaaggtcagcctgagagaccatctcgacgcaccgtttagagtggaaggc
ggctggggcatcgccacttatcatccgtcgttcgcgttacggcagcagactgatgcagac
cgcgacaaagtattggccgagatcagcaacgcgcttatccgggcgcgtgagctggccgaa
tccgccgcgccgaccacaaagaaacagcggcagtga
DBGET
integrated database retrieval system
