Paraburkholderia phytofirmans PsJN: Bphyt_3800
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Entry
Bphyt_3800 CDS
T00765
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
bpy
Paraburkholderia phytofirmans PsJN
Pathway
bpy02020
Two-component system
bpy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bphyt_3800
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bphyt_3800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpy03021
]
Bphyt_3800
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bpy02035
]
Bphyt_3800
Transcription machinery [BR:
bpy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bphyt_3800
Bacterial motility proteins [BR:
bpy02035
]
Flagellar system
Flagellar assembly proteins
Stator
Bphyt_3800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HopW1-1
MutS_III
MarR
Motif
Other DBs
NCBI-ProteinID:
ACD18188
UniProt:
B2T7A7
LinkDB
All DBs
Position
1:complement(4249596..4250330)
Genome browser
AA seq
244 aa
AA seq
DB search
MYNAQGKISQAEVLTKYAPLVRRLGLQLVAKMPASVDLDDLIQAGMIGLLDAAGRYKEDQ
GAQFETYASQRIRGAMLDELRSNDWLPRSLRRTSREVETAVHKVEQNLGRSASETEIAEH
LQMPLDEYQSMLQDLHGSQLIYYEDFDRSADDEPFLDRYCVDHSDPLSALLDDSLRSALV
EAIDRLPDREKLLMSLYYERGMNLREIGAVMEVSESRVCQLHSQAVARLRTRLREMAWAN
AEAT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgctcagggaaagatttcccaagccgaagttctgacgaagtacgcaccgctg
gtgcgtcgtctcggcttgcagctcgtcgccaagatgccggcgagcgtcgatctcgacgat
ctgatccaggccggcatgatcggactgctggacgcggcaggccgctacaaggaagaccag
ggcgcgcagttcgagacttacgcgagccagcggattcgcggcgcgatgctcgacgagttg
cgcagcaacgactggttgccgcgcagcttgcggcgcacctcgcgagaagtggaaacggcg
gtgcacaaggtggagcagaatctgggccgctcggcgagcgaaacggagattgccgagcat
ctgcaaatgccgctcgacgagtatcagtcgatgctgcaggatctgcacggcagccagctg
atctattacgaagacttcgaccgttcggcggacgacgagccgttcctcgaccgctactgc
gtcgatcactcggacccgctgtcggcgctgctcgacgacagcttgcgctcggcgctggtg
gaggcgatcgaccgcctgccggaccgcgagaagctgctgatgtcgctgtactacgaacgc
ggcatgaacctgcgcgaaatcggcgcggtgatggaagtcagcgaatcgcgagtctgccag
ttgcacagccaggccgtggcccgtttgcgtacgcgcttgcgtgagatggcctgggcgaac
gccgaggcgacctga
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integrated database retrieval system
