Bradyrhizobium sp. ORS 278: BRADO1371
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Entry
BRADO1371 CDS
T00516
Symbol
rpoH
Name
(GenBank) sigma H (sigma 32) factor of RNA polymerase; transcription of heat shock and stress proteins
KO
K03089
RNA polymerase sigma-32 factor
Organism
bra
Bradyrhizobium sp. ORS 278
Brite
KEGG Orthology (KO) [BR:
bra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bra03021
]
BRADO1371 (rpoH)
Transcription machinery [BR:
bra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BRADO1371 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
KORA
Sigma70_r4_2
HTH_3
HTH_7
GP3_package
GntR
HTH_23
HTH_Crp_2
HTH_28
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CAL75266
RhizoBase:
BRADO1371
UniProt:
A4YMZ0
LinkDB
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Position
complement(1456134..1457033)
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AA seq
299 aa
AA seq
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MARTATLPVLNGESGLARYLSEIRKFPMLEPQEEYMLAKRWREHDDSDAAHKLVTSHLRL
VAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALDEGDLRPDQVKLIAKRLGVTDQDVIDMNRRL
GGDASLNAPIRDDGEAGEWQDWLVDTSPNQEAIMAEHEEYDHRRQALNGAIGVLNARERR
IFEARRLADEPMTLEDLAAEFGVSRERVRQIEVRAFEKVQSAVKGAIAKQEAAALEAAH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtacagctacactgccggttctcaacggagaatccggtcttgctcgctacctc
tccgagatccgcaagttcccgatgctggaaccgcaggaggagtacatgctcgccaagcgt
tggcgtgagcatgacgacagcgacgcagcccataaactcgtgaccagccacctcaggctc
gtggccaagatcgccatgggctatcgcggctacggcctgccgatatccgaagtcgtgtcg
gaaggcaatgtcggcctgatgcaggcggtgaagcggttcgagcccgagaagggttttcgc
ctcgccacctacgccatgtggtggatcaaggcgtcgatacaagagtacatcctgcggtcg
tggtcgctcgtgaagatgggcaccaccgcgaaccagaagaagctgttcttcaacctgcgc
aaggcgaagagcaagatctcggcgctggatgaaggcgatctgcgtccggaccaggtcaag
ctgatcgcgaagcgcctcggcgtgaccgatcaggacgtgatcgacatgaaccgccgcctc
ggcggcgacgcctcgctgaacgcgccgatccgcgacgacggcgaagcgggcgaatggcag
gactggctggtcgatacctcgcccaaccaggaagccatcatggccgagcacgaggaatac
gaccaccgccggcaggcgctgaacggcgcgatcggcgtgttgaatgcgcgcgagcgccgc
atcttcgaggcgcggcggctggccgacgagccgatgacgctcgaggatctcgcggccgag
ttcggcgtgtcgcgcgagcgcgtccgccagatcgaggtgcgcgcgttcgagaaggtgcag
tccgccgtcaagggcgccatcgccaagcaggaggcggcggcgctggaggccgcgcactag
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