Bradyrhizobium sp. BF49: BF49_3873
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Entry
BF49_3873 CDS
T04337
Name
(GenBank) DNA topoisomerase IB poxvirus type EC 59912
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
brad
Bradyrhizobium sp. BF49
Brite
KEGG Orthology (KO) [BR:
brad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brad03032
]
BF49_3873
03400 DNA repair and recombination proteins [BR:
brad03400
]
BF49_3873
Enzymes [BR:
brad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BF49_3873
DNA replication proteins [BR:
brad03032
]
Prokaryotic type
DNA Topoisomerases
BF49_3873
DNA repair and recombination proteins [BR:
brad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BF49_3873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CUT12793
LinkDB
All DBs
Position
I:3982572..3983675
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AA seq
367 aa
AA seq
DB search
MLRQTSNEEEVLDRTACVAATIAEEGLRYVSDSAPGYTRKRTGTTFGYYDKDGKRITDAA
VIRRIKSIGIPPAYESVWICPSPNGHIQATGLDARGRKQYRYHPKWRELRDQNKYEHIIL
FAAALPALRERVAADMKRDGLPREKVLATIVSLLEKTLIRVGNAEYAEKNKSYGLTTMRR
KHVAVGRGVFRFDFTGKSGKQWRLRVEDKGIAAIVKRCAEIPGHELFKYLDDDGQPRTVD
SGDVNAYIKDITGEDFSAKDFRTWAGTVLAALALAEFKNYDSQAEAKRNVVAAIESVSKQ
LGNTPAICRKCYVHPEVLNAYMSGDLVKMIQAKIAQKFKRQYAKLTSDEIVVLAFLRKRL
DSLKVPA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctccgacaaaccagcaacgaagaagaggttctggaccgcaccgcctgcgtcgcggcc
accatcgcggaagaaggcctccgctatgtcagcgactccgcgcctgggtacacccgcaag
cggactggaaccactttcggctactacgacaaggacggcaagcgcatcaccgatgcggcc
gtcatccgacgcatcaaatcaatcggcatcccgccggcctacgagtccgtgtggatctgc
ccgtcgccgaacggccacatccaggcaaccgggctcgatgcgcggggtcgcaagcagtat
cgctaccatccgaagtggcgcgagctccgagaccagaacaaatatgagcatatcatcctg
ttcgctgccgcgctgcccgcgttgcgggagcgggtcgccgccgacatgaagcgagacgga
ctgccccgcgagaaggtgctggccacgatcgtcagtcttctggagaagacattgatccgg
gtcggcaatgccgagtatgccgagaaaaacaagtcctacgggctcaccaccatgcgccgc
aagcacgtcgcggtcgggcgcggcgtctttcgtttcgacttcacgggcaagtcgggcaaa
caatggaggcttcgcgtcgaggacaaggggatagccgcgatcgtgaagcgctgcgccgag
atcccgggacatgagctcttcaagtacctcgacgacgacggacagccccgcactgtcgat
tccggcgacgtcaacgcctacatcaaggacatcacgggggaggacttcagcgccaaggat
tttcggacttgggcgggaaccgttctggcggcgctcgcgcttgccgaattcaagaactac
gacagccaggccgaggcgaagcgcaacgtcgtcgccgcgatcgaaagcgtctcgaagcag
ctcggcaacacaccggccatctgccgcaagtgctacgtgcacccggaagtcctgaacgcc
tacatgtcaggtgatctcgtgaagatgattcaggccaagatcgcgcagaagttcaagcgc
cagtacgccaagctcacttccgacgagatcgtggtgctggcatttctccggaaacgtctc
gattctttgaaggtgcccgcctag
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