Brevundimonas sp. 'scallop': E4341_04470
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Entry
E4341_04470 CDS
T09204
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
bres
Brevundimonas sp. 'scallop'
Pathway
bres03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bres00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
E4341_04470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bres03400
]
E4341_04470
DNA repair and recombination proteins [BR:
bres03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
E4341_04470
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GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QIF81004
UniProt:
A0A6G6RF66
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Position
complement(917018..917884)
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AA seq
288 aa
AA seq
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MAARPTWQGHLKLSLVTCPVALYTATTSTNDVRFHLINPDTNNRIRMVPTDPDAGPVERS
DLVRGYEVSKDEYVLFDDADFDKVKLESTKTISIDKFVDEDDIDRLYWDDPFFVVPEKGA
GVEAFAVIRDAMKKQGKVALGQLVLRGKERQLALEVRGKGLIAYTLRAHDEVRDSDDYFD
DIPTVKADPDMVEIAARIIGQKEADFDPTDFKDGYDDALRAMIKAKSKGGKGVVDVAEPD
DTNVIDLMAALRNSLKGSATGTKKPAAKKAPAKKATPKKAAARKKTAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgccccacctggcaaggacatctgaagctgtcgctggtcacctgtccggtg
gccctctacacggcgacgaccagcacgaacgacgtgcggtttcacctgatcaatcctgac
accaacaatcgcatccgcatggtgccgaccgacccggacgccgggccggtcgaacgcagc
gatctggtgcgcggctatgaggtgtccaaggacgaatacgtcctgttcgacgacgccgac
ttcgacaaggtgaagctggaaagcaccaagaccatctcgatcgacaagttcgtcgatgag
gacgacatcgaccgactgtattgggacgatcccttcttcgtggttcccgagaaaggcgcg
ggcgtcgaggccttcgccgtcatccgcgacgccatgaagaagcagggcaaggtggcgctg
ggtcagctggtcttgcgcggcaaggagcgccagctggcgctggaggtccggggcaaggga
ctgatcgcctacaccctgcgcgcccatgacgaggtgcgcgattccgacgattatttcgac
gacattccgacggtgaaggccgatcccgacatggtcgagatcgccgcgcgcatcatcggc
cagaaggaggcggactttgacccgaccgatttcaaggacggctacgacgacgccctgcgc
gcgatgatcaaggccaagtcgaagggcggcaagggcgtggtcgatgtcgccgaacccgac
gacaccaatgtcatcgacctgatggccgcactgcggaacagcctgaaagggtcggcgacg
gggacgaagaagccagccgcgaagaaggccccggcaaagaaggcgacgcccaagaaggct
gcggcaaggaagaagacagcggcctag
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