KEGG   Brevundimonas sp. 'scallop': E4341_04470
Entry
E4341_04470       CDS       T09204                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
bres  Brevundimonas sp. 'scallop'
Pathway
bres03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bres00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    E4341_04470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bres03400]
    E4341_04470
DNA repair and recombination proteins [BR:bres03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     E4341_04470
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QIF81004
UniProt: A0A6G6RF66
LinkDB
Position
complement(917018..917884)
AA seq 288 aa
MAARPTWQGHLKLSLVTCPVALYTATTSTNDVRFHLINPDTNNRIRMVPTDPDAGPVERS
DLVRGYEVSKDEYVLFDDADFDKVKLESTKTISIDKFVDEDDIDRLYWDDPFFVVPEKGA
GVEAFAVIRDAMKKQGKVALGQLVLRGKERQLALEVRGKGLIAYTLRAHDEVRDSDDYFD
DIPTVKADPDMVEIAARIIGQKEADFDPTDFKDGYDDALRAMIKAKSKGGKGVVDVAEPD
DTNVIDLMAALRNSLKGSATGTKKPAAKKAPAKKATPKKAAARKKTAA
NT seq 867 nt   +upstreamnt  +downstreamnt
atggccgcccgccccacctggcaaggacatctgaagctgtcgctggtcacctgtccggtg
gccctctacacggcgacgaccagcacgaacgacgtgcggtttcacctgatcaatcctgac
accaacaatcgcatccgcatggtgccgaccgacccggacgccgggccggtcgaacgcagc
gatctggtgcgcggctatgaggtgtccaaggacgaatacgtcctgttcgacgacgccgac
ttcgacaaggtgaagctggaaagcaccaagaccatctcgatcgacaagttcgtcgatgag
gacgacatcgaccgactgtattgggacgatcccttcttcgtggttcccgagaaaggcgcg
ggcgtcgaggccttcgccgtcatccgcgacgccatgaagaagcagggcaaggtggcgctg
ggtcagctggtcttgcgcggcaaggagcgccagctggcgctggaggtccggggcaaggga
ctgatcgcctacaccctgcgcgcccatgacgaggtgcgcgattccgacgattatttcgac
gacattccgacggtgaaggccgatcccgacatggtcgagatcgccgcgcgcatcatcggc
cagaaggaggcggactttgacccgaccgatttcaaggacggctacgacgacgccctgcgc
gcgatgatcaaggccaagtcgaagggcggcaagggcgtggtcgatgtcgccgaacccgac
gacaccaatgtcatcgacctgatggccgcactgcggaacagcctgaaagggtcggcgacg
gggacgaagaagccagccgcgaagaaggccccggcaaagaaggcgacgcccaagaaggct
gcggcaaggaagaagacagcggcctag

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