Brevundimonas sp. GW460-12-10-14-LB2: A4249_05900
Help
Entry
A4249_05900 CDS
T04395
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
brg
Brevundimonas sp. GW460-12-10-14-LB2
Pathway
brg03410
Base excision repair
brg03430
Mismatch repair
brg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4249_05900
03430 Mismatch repair
A4249_05900
03440 Homologous recombination
A4249_05900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brg03400
]
A4249_05900
DNA repair and recombination proteins [BR:
brg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A4249_05900
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A4249_05900
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A4249_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ANC53227
UniProt:
A0A160HWL0
LinkDB
All DBs
Position
complement(1205609..1207420)
Genome browser
AA seq
603 aa
AA seq
DB search
MADDSGAKTLNAFLGVSRSLSGRAWRQRPADAATTRAHMQTLNLEEPLARALASRGVRAD
QGQDFLTPTLRALFPDPSSFIDMDAAADAILNALQAKANIHVFADYDVDGASSAALLVRW
FRAMGHTLSIYVPDRMTEGYGPSAKAFDTLKASGADLVITVDCGAAANEALAHAAAIALN
VVVIDHHLMRTEPPTALAVVNPNRPGCNSGQGNLAAAGVVFVLLAALNREGRRRSLFAER
PEPDIRQWLDLAALGAICDVTGLTGFNRALTGLGLKVMSDWRNPGLRALLAAAGAEPGPA
KSNHAGFILGPRINAGGRIGRSDLGARLLSTDDPTEAEALAIELDALNLSRRDVERAVTE
AVVRRVEATGAHADESAVVVVAGEDWHPGVVGIVAGRLRERWRKPVIVIGVDPVTGLGKG
SGRSQPGMNLGRAIQAAWESGILLAGGGHAMAAGLTMDGARVSELTAFLNERLATERVEA
VAQDVLEIDALIDPAAATRDLFESFERLAPFGPANPEPSFALSGVQAREPVAMNGGHVRC
RLIGPDGASVKAIAWRCADLPTGQALLSGQGGLSIVGRLKADDWNGRKGVQFEIEDVADP
RMI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacagcggcgcaaagactctgaacgcattcctcggcgtgtctcgatccctg
tccgggcgcgcctggcgtcaacgtccggccgacgccgcaacgacgcgcgcgcacatgcag
accctgaacctggaagaaccgctggcccgggccttggcctcgcggggcgttcgcgccgac
cagggccaagatttccttaccccgaccctgcgcgccctgtttcccgacccgtccagcttt
atagatatggacgcagcggccgatgcgatcctgaacgcgcttcaggccaaggcgaacatt
catgtgttcgccgactacgacgtggacggggcctccagcgcggcgctgctggtgcgttgg
ttccgggcgatggggcatacgctttcgatctatgttccagaccggatgaccgaaggttac
ggtcccagcgccaaggccttcgatacgctgaaggcgtcgggcgcagacctggtcatcacg
gtggattgcggggcggcggcgaacgaagccctggcccatgcggccgccatcgccctgaac
gtcgtcgttatcgatcaccacctgatgcgcaccgagccgccgacggcgctggcggtcgtc
aatccgaaccggccggggtgcaactcgggtcagggaaatctggcggcggcaggcgtcgtc
ttcgtgcttctggcggcgctgaatcgtgaaggtcggcgtcgtagtctgtttgccgagagg
cccgagccggacattcgtcagtggctggatctggcggccctgggcgccatctgcgacgtg
accggtctgaccggcttcaatcgcgcgctgaccggccttggtctcaaggtcatgagcgac
tggcgcaatccgggtctgcgcgcgctgttggcggcggcgggcgccgaaccgggaccggcc
aagagcaatcatgccggtttcatcctgggaccgcgcatcaatgcgggaggacgcatcggt
cgctccgacctcggcgcaaggctgctgtcgacggatgatccgaccgaggccgaggccctg
gccatcgaactcgatgcactgaatctatcgcggcgcgatgtcgagcgggccgtcaccgag
gcggtcgttcgtcgtgtcgaggcgaccggcgcccatgccgacgagagcgcggtcgtcgtg
gtcgcgggcgaggactggcatccgggcgtcgtcgggatcgtcgccggccgtttgcgcgag
cgctggcgcaagccggtgatcgtcatcggcgtcgatcccgtgaccggtctcggaaaaggg
tcaggccggtcacagccaggcatgaacctgggccgcgcgatccaggcggcctgggagagc
ggaatcctgctcgctggcggcggtcatgccatggcggcaggcctgacgatggacggtgcg
cgcgtgtccgagctgaccgccttcctgaacgagcgactcgctaccgaaagggtcgaagcg
gtcgcccaggacgtgctggagatcgacgcgctgatcgacccggcggcggcgacgcgcgat
ctgttcgaatcgtttgagcgtctggccccattcggccccgccaacccggaacccagcttc
gccctgagcggcgttcaagcccgcgaacccgtcgccatgaacggcggtcatgtgcggtgc
cggctgatcggtccggatggcgcttcggtcaaggccatcgcctggcgctgcgccgatctg
ccgacgggccaagccttgctgtcggggcagggcgggctgagcatcgtgggccggctgaag
gctgacgactggaatgggcgcaagggcgtgcagttcgagatcgaggatgtcgccgatcct
cgaatgatctga
DBGET
integrated database retrieval system
