Brooklawnia propionicigenes: brsh051_25890
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Entry
brsh051_25890 CDS
T09125
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
broo
Brooklawnia propionicigenes
Brite
KEGG Orthology (KO) [BR:
broo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
broo03019
]
brsh051_25890
Enzymes [BR:
broo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
brsh051_25890
Messenger RNA biogenesis [BR:
broo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
brsh051_25890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
TetR_C_24
nSTAND3
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
BEH03308
LinkDB
All DBs
Position
2821643..2824387
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AA seq
914 aa
AA seq
DB search
MTEPEAGLAHVVAQFAAGYSFSFDDFQTDACLKLASGHGVLVAAPTGSGKTVVGEFACWL
ALRQGTKCFYTTPIKALSNQKFHDLVARHGADNVGLLTGDTSINSEAPIVVMTTEVLRNM
IYARSRTLSGLSSVVMDEVHYLADRFRGAVWEEVILGLADSVQLVALSATVSNAEEFGEW
LDEVRGEVDVVVSERRVVPLYQHVLVGRRLYDLFAGQAPTEVPLPQSRADVNPELLRLAK
ADARVTRDDSRRMRGRRVRGKIEARQRASGEGVIRAPRRDGAVEVLQQQNLLPAIFFIFS
RQGCDQAVRQMLGSDIRLTDRAEREQLLQIAAKHVGMLTAADKRALDWDTFIEALGRGIA
AHHAGLLPVFKAIVEEGFVKGLVKVVFATETLALGINMPARTVVVEKLVKYNGETHAELS
PGEYTQLTGRAGRRGIDVEGHAVVFWQPGMDPRALAGLASRRTYPLKSSFAPTYNMAVNL
VGSIGRVRARALLEQSFAQFQTDRRVVAMARQASRDDEQAEILWAQAECDRGDFRQYAEL
RDRIGALEAEAAKERKRDHRAEIAGSLTDLEAGDVFWIPAGKHQGWAAVITPAVAHQPWP
TVMTAGRQIVQLADRDVTQPVTAISRVRVPKRFDVRSAADRRQLANSLAARAESLGERPV
RTGRPRADAELADEIAELRAQLRVHPCHDCPDREEHARAAEQALRLTRGHERTRAKAKAR
AQSIANRFDRICGVLDSLGYLDGDRLTERGAMLTRIYNELDLLVAESIRDGVFDDLEVPA
LAAVLSSLVYESRGDQQGQMRTMPDSPSEQAQSRVRRIWRDLGIVERDNRVERTPAPDIG
FADAAYQWASGVGLAAVLDSSGLPAGDFVRWVRQVIDLAGQIAQAPGTEALAPKCRQLVT
VMRRDIADFAVDED
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccggaggcagggctggcccacgtggtcgcgcagttcgctgcgggctactca
ttttcgtttgacgacttccaaaccgacgcctgcctgaagctcgcctcgggacatggcgtg
ctggtggccgccccgaccgggtcgggcaagaccgtggtgggggagttcgcctgctggctg
gcgttgcggcagggcacgaagtgcttctacaccaccccgatcaaggccctgagcaaccag
aagttccatgatctggtggcccggcacggtgcagacaatgttggcctgctgaccggtgac
acctcgatcaactccgaggcgccgatcgtggtgatgaccaccgaggtgctccgcaacatg
atctatgcccgctcgcggaccctgtcggggctttcctcggtagtgatggacgaggtgcac
tatctggccgaccggttccgcggcgccgtctgggaggaagtgatcctcgggctggccgat
tcggttcagctggtcgcgctgtccgcgacggtctccaatgccgaggaattcggcgagtgg
ctcgatgaagtgcgcggcgaggtcgatgtggtggtcagcgaacgccgcgtcgtcccgctc
tatcagcatgtgctggtgggccgcagactgtacgacctgttcgcggggcaagcacccacc
gaagtaccgctgccgcagtcccgggccgatgtcaatccggagctgctgcggctggcgaag
gccgacgcgcgggtcacccgcgatgactcccggcggatgcgtggccgccgggtgcgcggc
aagatcgaagcgcggcaacgcgccagtggggagggcgtcatccgggcaccccggcgcgac
ggcgcggtcgaggtgctgcagcagcagaatctgctgcccgcgatcttcttcatcttcagc
agacagggctgcgaccaggcagttcgccagatgctgggatccgacatccggctcaccgac
cgtgccgaacgcgagcaattgctgcagatcgccgcgaaacatgtgggcatgctgaccgcg
gccgacaaacgcgcgctcgactgggacaccttcatcgaagccctcggacgcggcatcgcc
gcccatcacgccggactgctgccggtcttcaaggcgatcgtggaggaaggtttcgtcaaa
ggtctggtgaaggttgtcttcgccaccgagacactggcgttgggcatcaacatgccggcc
cgcacagtggtggtcgagaagctcgtgaagtacaacggcgagacccacgccgagctgagc
cccggcgagtacacccagctgaccggccgggccggacgacgcggtatcgacgtcgaaggt
catgccgtggtgttctggcaaccgggaatggacccgcgggcactggccgggctggcatcg
cggcgaacctatccgctgaagtcgagtttcgcgccgacctacaacatggcggtcaatctg
gtggggtcgatcggacgggtgcgcgcccgcgcgctgctggagcagagcttcgcgcagttc
cagaccgaccggcgggtggttgcgatggcccggcaggccagccgcgatgacgagcaggcc
gagatcttgtgggcgcaggcggagtgcgaccgcggcgatttccggcagtacgccgaactg
cgcgaccgcatcggggcgctggaggccgaggcggccaaggaacgcaaacgcgatcatcgc
gccgagatcgccggatcgctgacagacctggaggccggcgacgtcttctggatcccggcc
ggcaagcatcagggctgggccgcggtcatcacccccgcggtggcgcatcagccctggccg
acggtgatgacggcgggacgccagatcgtccagctggccgaccgcgacgtcacccagccg
gtcacggcgatctcgcgggtgcgggtgcccaagagattcgatgttcgctcggccgccgac
cgcaggcagctggcgaattcgctggccgcgcgggccgagtcgctgggtgagcgcccggtg
cggaccggccggccgcgagccgacgccgaactggccgatgagatcgccgagctgcgggct
cagttgcgcgtccacccgtgccatgactgccccgatcgggaggagcacgcgcgggccgcc
gagcaggcgttgcggttgactcgcggtcacgaacgcacccgggccaaggccaaggcgcgc
gcgcagtcgatcgcgaatcgcttcgaccggatctgcggggtcctcgattccctcggttac
ctcgacggggaccggctcaccgagcgcggcgccatgctgacgcgcatctacaacgagctt
gatctgctggtggccgagagcatccgggacggcgtattcgacgacctcgaggtgcccgca
ctggcggcggtgctgtcgagcctggtctacgagtcgcgcggcgatcagcagggccagatg
cgcacgatgccggactcgcccagcgaacaggcgcagagccgggtgcgccggatctggcgc
gatctggggattgtcgagcgcgacaaccgtgtggagcgcaccccggcacccgatatcggt
ttcgcggacgccgcctaccagtgggcatcgggagtgggcctggccgcggtgctcgactcg
agcgggctgcccgccggcgatttcgtccgctgggtgcgccaggtgatcgacctggccgga
cagatcgcccaagctcccggcaccgaggcgctggccccgaaatgccgccagctggtcacg
gtgatgcgccgtgacatcgccgacttcgcggtcgacgaggactga
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