Bradyrhizobium roseus: QUH67_32575
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Entry
QUH67_32575 CDS
T09605
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
bros
Bradyrhizobium roseus
Brite
KEGG Orthology (KO) [BR:
bros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bros03019
]
QUH67_32575 (hrpB)
Enzymes [BR:
bros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QUH67_32575 (hrpB)
Messenger RNA biogenesis [BR:
bros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QUH67_32575 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_C
HA2_N
AAA_30
AAA_19
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WKA28226
LinkDB
All DBs
Position
complement(6878155..6880632)
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AA seq
825 aa
AA seq
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MPLTFDTPLPIDAVLDELGRTLATNNTAVLVAPPGAGKTTRVPLALLDAPWLNGKKIIML
EPRRIAARASAERMARTLGERTGDTVGYRVRFGSKISRATRIEVVTEGIFARQILDDPEL
SGVAAVLFDEFHERSLDADLGLALARDAQTGLREDLRILVMSATLDGARVGQLLGDAPVV
ASEGRAFPVETRYLGRKADAPIERQMADAIATALRADPGSVLAFLPGAAEIRRTQNFLSE
RVHDASVEIVPLFGALDAAVQDRAIAPAPKGQRKVVLATSIAETSLTIEGVRIVVDSGLA
RVPRYEPDIGLTRLETVRASRAAVDQRRGRAGRTEPGVCYRLWDEPQTASLAAYTQPEIL
SADLSSLVLDLAQWGVRDPATLAFLDPPPAPALKEAKALLDELGALDGDGRITAEGKSLR
ALALPPRLARMIVDSHRLGAGEEAADIAAVLTERGLGGDSVDLDVRLDRFRRDRSPRASS
ARSLAQRWAQQVATTEGPPAADISPTTGIMLALAFPDRVARNRGNGSFVLANGRGAAVEQ
TSSLARAPYIAVAELTGTAAQGRILLAAPIAQEDIETRFADQIEDREEISFDRGAMALRG
RRKRTLHAITLSEAPVSLSPSAETARIFAAGLVAAGLDRLPWSKALKQWRDRVMFLRKAE
GDSWPDLSDTALAAGAENWLAPALYDKTALKELSSGDLSDALMALLPWELRARLDREAPT
HFEAPTGTMLAIDYEAEQGPTIAVRLQELFGLNAHPSIAKGAVPLVLELLSPAQRPVQVT
RDLPGFWRGSYAAVRSDLRGRYPRHPWPEDPATAPPTRRVKPRGT
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
ttgcctcttactttcgacactccacttccgatcgacgcggtgctcgatgaactcgggcgc
acgctcgcgaccaataacactgccgtcctggtagcgccgcccggcgccggtaagaccacg
cgggtgccgctggcgctgctcgacgcgccctggctgaacggcaagaagatcatcatgctg
gagccgcggcggatcgcggcccgcgccagcgccgaacggatggcgcggacgctcggcgag
cggacaggggatacggtcggctatcgcgtccgcttcggctcgaagatttcgcgcgcgacc
cggatcgaggtcgtcaccgagggcattttcgcgcggcagattcttgacgatcccgaattg
tccggcgtcgccgccgtgctgttcgacgagtttcacgaacgctcgctcgatgccgacctg
ggcctggcgctggcgcgcgacgcgcaaaccggccttcgcgaggatctccgcatcctggtg
atgtcggcgacgcttgacggcgcgcgggtcggtcaactgctgggcgacgcgcctgtcgtc
gccagcgaaggccgggcttttccggtggagacgcgctatctcggccgcaaggccgatgcg
ccgatcgagcggcagatggcggatgcgatcgccaccgcgttgcgcgccgatcccggctcg
gtgctagcattcctgccgggcgccgccgaaatccgccgcacgcagaattttctttccgag
cgcgttcacgatgccagcgtcgagatcgtgccgctgttcggcgcactcgacgccgccgtg
caggaccgcgccatcgcaccggcgccgaagggccagcgcaaggtcgtgctggcgacctca
attgccgagacctcgctgaccatcgagggggtgcgcatcgtcgtcgattccggcctggcg
cgggtgccgcgttatgagcctgacatcggcctgacccggctggagaccgtgcgggcctcg
cgcgccgcggtcgatcagcgccgtggccgcgccggccgcaccgagcccggtgtgtgctac
cggctgtgggacgagccgcagaccgcctcgctcgccgcctacacccagcctgaaattctc
tccgccgatctttcctcgctggtgctcgatctcgcgcaatggggcgtgcgcgatcccgct
acactggcttttctggatccgccgccggcaccggcgctgaaggaggcgaaggcgctgctc
gatgagctcggcgcgctcgatggcgacggccggatcaccgcggaaggaaaaagtctgcgc
gcgctggcgctgccgccacggctggcgcggatgatcgtggattcacaccggctcggggcc
ggcgaagaggccgccgacatcgccgcggtcctgaccgagcgcggcctcggcggcgacagc
gtcgatctcgacgtcaggctcgaccggttccgccgcgaccgctcgccacgcgcttccagt
gcccgcagcctggcgcaacgctgggcgcagcaggtcgcgacgacggaaggcccgcctgcc
gcggatatctcgcctaccaccggcatcatgctggcgctggccttccccgaccgcgttgcg
cgcaaccgcggcaatggcagcttcgtgctcgccaatggccgcggcgcggccgtcgagcag
acctcgtcgctggcgcgcgcgccctatatcgcggtcgccgaactgaccggcaccgcggcg
caggggcgcatcctgctggccgcgccgatcgcgcaggaggacatcgaaacgcgcttcgcc
gaccagatcgaggacagggaagaaatctcgttcgatcgcggcgcgatggcgttgcgcggg
cgccgcaagcggacgctgcacgccatcacgctgtcggaggcgccggtctcactgtcgccc
tcggcggagaccgcgcggatttttgcggcgggactggtcgccgccgggctcgacaggctg
ccgtggtcgaaagccctgaagcaatggcgcgaccgcgtgatgttcctgcgcaaggcggaa
ggcgacagctggcccgatctgtccgataccgcgctggctgccggcgccgaaaactggctg
gcgccggcgctgtacgacaagaccgcgctgaaggagctttcctcgggcgatctctccgac
gcgctgatggcgctgctgccgtgggaattgcgcgcgcggctcgatcgtgaagcgccgact
catttcgaggcgccgaccggcaccatgctggcgatcgactatgaggcggagcaggggccg
accatcgcggtccgtctgcaggaactgttcgggctcaacgcccatccctcgatcgccaag
ggcgcggtgccgctggtgctggaattgctgtcgccggcgcagcgcccggtgcaggtgacg
cgcgacctgccgggcttttggcgcggcagctatgccgccgttcgctcggacttgcgcggc
cgctatccccgccatccctggccggaagacccggccaccgcgccgccgacgcgccgcgtc
aagccgcgcggcacttga
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