Brassica rapa (field mustard): 103832343
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Entry
103832343 CDS
T03449
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03030
DNA replication
brp03410
Base excision repair
brp03420
Nucleotide excision repair
brp03430
Mismatch repair
brp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103832343
03410 Base excision repair
103832343
03420 Nucleotide excision repair
103832343
03430 Mismatch repair
103832343
03440 Homologous recombination
103832343
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
brp01009
]
103832343
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brp03032
]
103832343
03400 DNA repair and recombination proteins [BR:
brp03400
]
103832343
Protein phosphatases and associated proteins [BR:
brp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103832343
DNA replication proteins [BR:
brp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
103832343
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
103832343
MMR (mismatch excision repair)
DNA polymerase delta complex
103832343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
103832343
NCBI-ProteinID:
XP_009106579
UniProt:
M4F1V8
LinkDB
All DBs
Position
A07:28104993..28107796
Genome browser
AA seq
474 aa
AA seq
DB search
MTHTETLNILDELESLVSDQLQVVSYKWLSRNFSISSKTAKSLLKDFVEKNGKGFEVVYI
VSGWLKNTPSDHRTRLVSSSKLAEVEKEFNGTHSVSVYSVQASIPMEPAAIWNSEFVQAE
ELFREPSAADNCLRDNRFCGISNSFVKRNIEGAIANVTAPGTESVRTTVPSIPKVKNETV
TTAPAQKQPAKSSNDKEKPLPVPASKKNGQAQKSVTGTGGSLKNMWGRVPVKAEDESATI
EVKKQDNSEAQKPSHDVKSKGGSDDEAPDVSIRNRKRKVIFDFSDEECEDVISLASPSSP
KTIPRPDSEETKDLGPEKPDENVSGETKTDEPEVREEDWQKTASADTCGVRKEEKPMASA
AGFNPSKGRVTNAPSSPKRKKVLKTRIDERGREVTEVVWEDTETNTKKKEEDTDTSKKLN
DSKSANAGVNRAVVQKKSPAMGAANAGGKTGSKKGGNVKDPKQGNIMSFFKKKV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaccgaaaccctaaacatcctcgacgagctcgagtctctcgtctccgatcag
cttcaagtggtatcttacaaatggctgagtcgaaatttctctatttcatcaaaaactgcc
aagagcttgcttaaggatttcgtcgagaaaaatgggaaaggttttgaagttgtttatatt
gtgtctggatggctaaagaacactccttctgatcaccgcacaaggcttgtatctagttcc
aaacttgcagaagtggagaaagagttcaatggaactcattcagtttctgtatacagtgtt
caagctagtattccgatggagccagcagctatatggaacagtgagtttgtgcaagcagaa
gaactattcagggagccttctgccgctgataattgcttgagagacaacaggttttgtggc
atctctaattcttttgtaaagcgtaatatagagggagccattgcaaatgttacagccccg
ggaactgaaagcgtgagaactacagtgccttcaatccctaaggttaaaaatgaaactgtt
actactgctccagctcaaaaacagcctgcgaaatcctccaatgataaagaaaaacccctt
cctgtgcccgctagtaaaaagaacggtcaagcccaaaagagcgtgactggaactgggggt
tcgttgaaaaatatgtggggccgtgtgcctgtgaaagcagaagatgaatctgcaacaata
gaggtcaaaaaacaggataactcagaagctcaaaagccttctcacgatgtcaagagcaag
ggaggcagcgatgatgaggccccagatgtcagtatcaggaacagaaaaaggaaggtgata
tttgatttttctgacgaagagtgtgaagatgttatcagcttagcatctcctagcagtcct
aagactattccacggccagatagcgaagaaaccaaagatttaggtccggagaagcctgat
gaaaatgtatccggagagaccaaaacagatgaaccagaggtcagagaagaagactggcaa
aaaactgcttctgctgatacttgcggtgtcagaaaagaagagaaacctatggcttctgca
gctggatttaatccctcaaagggaagagtgacgaatgctcctagttcaccgaaaaggaaa
aaagtgttaaagacgcgtattgatgagcgtgggagagaagtaactgaggtagtctgggag
gatacagaaacaaacacaaagaagaaagaagaagacacggatacaagtaagaagttaaat
gatagcaaaagcgcaaacgctggcgttaacagggctgttgttcagaagaagagcccggcc
atgggagctgcaaacgcaggagggaaaacaggaagcaagaaaggagggaacgtgaaagat
ccaaagcaagggaacattatgtctttcttcaagaagaaagtctaa
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