Brassica rapa (field mustard): 103834615
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Entry
103834615 CDS
T03449
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103834615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103834615
03016 Transfer RNA biogenesis [BR:
brp03016
]
103834615
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
103834615
Messenger RNA biogenesis [BR:
brp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
103834615
Transfer RNA biogenesis [BR:
brp03016
]
Prokaryotic type
tRNA degradation factors
103834615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
103834615
NCBI-ProteinID:
XP_009108933
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All DBs
Position
A08:complement(14123526..14127573)
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AA seq
588 aa
AA seq
DB search
MALSILRSCIKSRLTIGVSRQLIVLESKVTCPERHAPGAEFLMRDVASKRRDFSSLTQPT
RTRFNTLNLPVTEAFKLGSSIINLEMVDDEKNHGSMLCHMDGTTVRSNVIVSHDKYNDDN
FLQVYYDETRYGERWRSHDPTDREIMCSHLIDRSIRPLFTAGFPANVMVNVCVLKTNWKH
EADAELMAIIATSAALMKLNITQARPIGVIRIGRINENIIINPTIDEQRRSDFNLLYVCT
RQNTIMADLVASEISESDLATNIKLAQLEAVKCIDSQVKLRERYESDKKVKLLTSNSKNL
QDTRTQSSNHSGREVALGQAHCVEIKSDVNRSDGRGSHQIRPVHCEAGYLHALHGSSLIS
CGETQVLCTATIGKPGETQSVDVLPRKRFRVDYDFPPFCTNHIMDIFSRRWREIGDGMFI
EKALLAVIPTQRNFPYAIHLNSKVLASDGSSSTTSVCGGSIALMDAGVPIKSHVAGVSIG
LVTDDETSNGQLENYRIITDTSGLENDLGEMDFKIAGTRNGITAIQLDAKSTLLSLDVIG
EAIKYGRQAHLQILDHMEQAINSPKETSYYKERRIEDDTGNHLKLSSS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtctattcttcgatcttgcatcaagtcaagactaactattggtgtgtctcgt
caactgatagtcttggaatcgaaagtaacttgtccggagcgtcacgctccaggagctgag
tttctgatgagggacgttgcatctaagagaagagatttttcttctcttactcagcctacg
cggacaagattcaacacccttaacctgcctgtcactgaagcattcaaacttggatctagc
ataattaacctggagatggtagacgacgaaaaaaatcacggttctatgttgtgtcacatg
gatggcactacagtacggtccaacgttatcgtgtcccacgacaaatacaatgatgataac
ttcttacaggtttactacgatgagactagatatggtgaaagatggagatctcatgaccca
actgatcgcgagatcatgtgttctcatctcattgacagatcgataagaccattatttact
gcaggattccccgctaacgttatggtaaatgtatgtgttttaaaaacaaactggaaacac
gaagctgatgctgagttaatggcgattattgcaacttcagctgctcttatgaaactgaat
atcactcaggctagaccgataggagtcatccgtattggaaggattaatgaaaatatcata
ataaatcccaccattgacgagcaacgtagaagtgatttcaacttgctatatgtatgtaca
cgtcaaaacactatcatggctgacctggtagctagtgagatctcagagagcgatctagca
actaacataaagctagctcagctagaggccgtcaaatgcattgactctcaagtaaagctg
agagaacgttatgagagtgacaagaaagttaaactgttgacatcgaattccaagaatttg
caggatacaagaactcaatcatcaaatcacagtggacgtgaagttgctctagggcaggca
cactgtgtagaaattaaatcggacgtcaacagatctgacgggagaggtagtcaccaaata
agaccagtacactgcgaagctggttatttacatgcgttgcatggttcatcacttatttca
tgcggagagacacaggtactatgcactgcaacaattggtaaacctggagaaacacaaagc
gttgacgtgctcccgagaaaacgttttcgtgttgattatgattttccaccattttgtaca
aatcatatcatggacattttttcacgtcgatggcgcgaaattggtgacggaatgtttatt
gagaaagcgttgcttgctgtcattcccactcaaagaaattttccatatgctattcacctt
aattcaaaggtattagcctcagatggctcttcatcgacaacaagtgtttgtggaggtagt
atagctttgatggacgctggagttcctataaaaagtcatgttgcaggtgtctctataggt
cttgtcactgatgatgagacatccaacggacagctagagaactaccgtataataactgat
acatcgggtttagaaaatgacttgggagaaatggatttcaaaattgctggtacacgaaat
ggtataacagcaattcagttggatgcaaagtcaactctactctcgttagatgtcattggt
gaagctataaagtatggacgtcaagcgcatcttcaaattcttgaccacatggagcaagcg
ataaattccccaaaagaaacttcttattataaggaaagaaggattgaagatgatacaggt
aatcatttgaagctttcaagttcttga
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