Brassica rapa (field mustard): 103836066
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Entry
103836066 CDS
T03449
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103836066
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
brp01007
]
103836066
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brp03016
]
103836066
Enzymes [BR:
brp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
103836066
Amino acid related enzymes [BR:
brp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103836066
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103836066
Prokaryotic type
103836066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
RNR_N
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
103836066
NCBI-ProteinID:
XP_009110533
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All DBs
Position
A08:20537055..20547824
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AA seq
1057 aa
AA seq
DB search
MAEAEKKILTEEELERKKRKDEKAREKELKKLKAEEKSKLAELKAKEVKDVPKKSTKKSS
KRDAPEENPEDFVDPEIPVGERKRLSLQMAKQYSPATVERAWYAWWEKAGFFVADAKSSK
PAFVIVLPPPNVTGVLHIGHALTTAIQDLIIRWKRMSGFNVLWVPGMDHAGIATQTVVEK
ELQRTGLTRHDLGREEYIKEVWKWKEENGSKILIQLRRLGASLDWSRECFTMDEHRSKAV
TEAFVRFYKEGLIYRDIRLVHWDCHLKTAVSDDEVEHIDIKEKTLLKVPGYDKPVEFGLI
TSFAYPLEGGLGEVVVATTRVETMLGDTAIAIHPDDARYTHLHGKVAVHPFNGRKLPIIC
DGELVDPGFGTGCVKITPAHDPDDFKLGKRHNLEFINIFTDDGKINTNGGPDFTGMPRFA
AREAIVEALKNQGLFRGSQNKEMRLGLCQRTSDVIEPMIKPQWYVNCSTIAKEALDVATN
DENKKLEFIPKQYTAEWRRWLENIRDWCISRQLWWGHRIPAWYATLEEDHLREIGAYNDH
WVVARTEEEAREEAAEKFSGKKFDLAQDDDVLDTWFSSGIFPLSALGWPDETDDFKAFYP
TSVLETGHDILFFWVARMVMMGMKLSGDVPFSKVYLHPMIRDAHGRKMSKSLGNVIDPIE
VIDGATLEALNKRLKKGNLDQRELVVAKEGQEKDFPNGISECGADALRFALVSYTAQSDK
INLDILRVVGYRQWCNKLWNAVRFALIRLGDGYSPPLDLSPETMPFSCQWILSVLNKAIS
KTVESLNAFEFSDAANTVYAWWQYQFCDVFIEAIKPYFVNPALASERAHAQHALWVALET
GLRLLHPFMPFITEELWQRLPSPKDSERKASIVICDYPSATENWKNEKVETEMETVIASV
KCLRALRAELLEKQKNERLPAFALCENNVTFEIVKSHELEIRTLANLSSLEVLLKGEDSA
PAGSAVETVNENLKVYLKVDRAINAEAEQGKIRNKIAELQKQKEKLQMMMSASGYEEKVP
ANIKEDNVTKLAKILQEFDFFEKESVRLVAETGQFRK
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcagagaagaagatcctcacagaggaggagctcgagcgtaagaagaggaag
gatgaaaaggctagagaaaaggagttgaaaaagctcaaagctgaagagaagtcgaagcta
gctgaactgaaggcaaaagaggttaaagatgtccctaagaagagcacaaagaagagttcc
aaaagggatgcacctgaagagaatcctgaggattttgtggaccctgagattcctgtgggt
gagaggaagaggctctctttacagatggctaagcagtacagtcctgctaccgtagagaga
gcatggtatgcctggtgggagaaagctggtttttttgtggcggatgctaagagttccaag
ccagcatttgttattgttcttcctcctccaaatgtgactggagtcttgcatattggccat
gccttgacaactgcaattcaggatttgattattcgttggaagagaatgtctgggtttaat
gtactgtgggtgccagggatggaccatgctggtattgctacacagactgtggttgagaaa
gagctccagcgtacaggattgactaggcatgaccttggccgtgaagaatacataaaggaa
gtgtggaagtggaaggaagaaaatggtagcaagattctaatacagctacggcgtctagga
gcttctcttgattggtctcgtgagtgttttacaatggacgagcatagatcaaaagctgtc
actgaggcctttgtacggttttacaaggaaggccttatctacagggatattaggcttgtt
cattgggattgtcatctgaaaacagctgtatctgacgatgaggttgagcatatcgatatc
aaagagaaaacgctactaaaagtgcctggctacgacaagccagtagagtttggtcttatt
acttcatttgcttaccctctggagggaggcttgggcgaggttgttgtcgccactacaagg
gtggaaacaatgcttggagatacagccattgcgattcatcctgatgatgcaagatacacc
catcttcatgggaaagtcgctgtgcacccatttaatggacgtaagctaccaatcatttgc
gatggagaacttgttgatccagggtttggtactggttgcgttaagattactcctgcccat
gaccccgatgattttaagctcggaaagcgtcacaatcttgagttcatcaacatattcact
gatgatggaaaaatcaacacaaacggcggacctgacttcacagggatgccacgctttgca
gcacgtgaggcaattgttgaagctttgaaaaaccagggactgttcagaggttcccaaaac
aaggaaatgaggcttggtctttgccaaagaaccagtgatgttattgagcctatgattaag
cctcagtggtacgtcaattgcagcacgattgcaaaggaggctctcgatgttgctaccaat
gatgaaaacaagaagctagaatttataccaaagcagtacactgcagaatggagaagatgg
ctagagaacatacgtgactggtgtatctcaagacagctttggtggggccacagaatacca
gcatggtacgccactctcgaggaagatcatctcagggagattggtgcatacaacgaccat
tgggttgttgctagaaccgaggaagaagctcgagaagaggctgctgaaaagttctctggg
aagaagtttgatctagcacaagatgatgacgtgcttgacacgtggttttcttctgggatc
tttccgttgtctgctctgggatggcctgatgaaaccgacgacttcaaagccttttaccca
acatctgtcctggaaactggacatgatattctcttcttttgggttgctcgtatggttatg
atgggaatgaaactaagtggcgacgttcccttcagcaaggtgtatttgcatccgatgata
cgtgacgcacatgggcgtaagatgtcaaagtctcttgggaatgtcattgacccgattgag
gtaatagacggggcaactcttgaggcgcttaataagagattaaaaaagggtaacttggat
caaagagagctggttgttgccaaagaaggacaagagaaagactttcctaacggtatttct
gaatgtggtgctgatgctcttcggtttgcactcgtctcttacactgctcagtctgacaaa
ataaacttggacattctccgtgtggttggttaccgtcagtggtgtaacaagctgtggaac
gcggtcaggtttgccttgataaggcttggcgatggttactcccctccgctggatctaagc
cccgaaacgatgccgttcagctgccagtggattctctctgtgctaaataaggccatatcg
aagacggtggagtcgctgaatgcatttgagttctcggatgcagccaacactgtatatgca
tggtggcagtatcagttctgtgatgtgttcattgaagctatcaagccttattttgtgaac
cctgctctggcttcagagagagctcatgcacaacatgcgctctgggtagctttggagact
ggtttgagactgcttcacccgtttatgccgtttattactgaagagctatggcaacgtctg
ccttcacctaaggactctgaaagaaaggcttctattgtgatatgtgactacccatctgct
acagagaattggaaaaatgagaaagtggagactgaaatggaaaccgttatagcgagcgtg
aagtgcttgagggcactccgtgctgagttgttggagaaacagaaaaacgaaaggttacct
gcttttgctctgtgtgaaaacaacgtaacattcgagattgtaaaatctcacgagttggag
attagaactcttgcaaacctatcgtccttagaggttttgttaaagggagaagactcggct
ccagctggttctgcagttgagacggtgaacgagaacctcaaggtgtatctcaaagtggac
agggccattaacgcagaagctgaacaaggaaagatcagaaacaagattgccgaactgcaa
aaacaaaaggagaagctacagatgatgatgagtgcgtcagggtacgaagagaaggtccct
gcgaacataaaagaagacaacgtcacaaagctagctaagatcctccaagaattcgatttc
tttgagaaggaaagtgttcgtctcgttgcagagaccggtcaatttaggaaatga
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