Brassica rapa (field mustard): 103838066
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Entry
103838066 CDS
T03449
Name
(RefSeq) crossover junction endonuclease EME1B
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103838066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brp03400
]
103838066
DNA repair and recombination proteins [BR:
brp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103838066
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
103838066
NCBI-ProteinID:
XP_009112728
UniProt:
M4FJ03
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Position
A09:39793544..39797306
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AA seq
527 aa
AA seq
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MEDHILISDGEDPTTPLPSLSKRPRKDPISAILISDSDPTPFKQQPESSSTPLFVPDTPL
SDEFSLVKCSFASNREDKFSGKRVISLDSEFEDSPGPVLADIGLDSGSSVADIAEASTGI
TQPSFGDNINWMHEVSVRSSLTNDTIEVDSEQEKENISIENMGRKKQIRSCKSRIITGGE
LPKKQLSREEKIRAMEEKKLRKEEEKLQKAIEAERKKLEKEKQKWEKGKLALKSIVAEID
TKLVEGSIGGLLLSRFSEKGITFRVAPNPIERSIVWTMTIPEDIALAFPEGPTICYVVLV
YEAEEFCNLVADEKFLENITRVQDRYPSYTVCCLTNKLMSYVKKREKEEYKNPGSWRRPP
IDEVLAKLTTHYVRIHSRDCVDEAEVSEHVVGLTTSLASCQFRKKLTMLSVNANGALVSK
DSVDKHLIKKSPWLKALVTIPKVQPRYAVAVWKKYPSMKSLLKVYMDPNISIHEKEFLLK
DLKVEGLVGGDIRLGAVCSKRIYRVLMSPSGTIKTDDVENGAAFFTQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcacattcttatctccgacggggaagatcccaccactccactcccatcactc
tcgaaacggcctcgaaaagatccgatctccgcgattctgatatccgattccgatccgacg
ccgtttaagcaacagccggaatcttcttccactcctttgttcgtccctgatacacctctc
tccgatgaattctctctcgtaaaatgctcctttgcttcaaaccgagaagacaaattctct
gggaaacgagtgatatctctggattcagagtttgaggatagtcctggacccgtgcttgct
gatattgggttggattctggatcaagtgttgcagatattgctgaggcgagtactggaata
actcagccaagttttggggataatattaattggatgcatgaagtcagtgttcgttcttca
ctgaccaatgatactatcgaggttgattctgagcaagagaaagaaaatataagcattgag
aatatgggtcgaaaaaagcagatcagaagttgtaagagtaggattattacgggtggagaa
ttgcccaaaaagcagctgtcgagagaagaaaaaatccgtgcaatggaggaaaagaagtta
agaaaagaggaagagaagttacagaaagcgattgaagctgagcgtaaaaagttagagaag
gaaaaacagaaatgggaaaagggaaagttagctctgaaatctattgttgctgagattgat
actaaactagttgaaggatccattggaggacttctactttcaaggttctctgagaaaggc
attacattccgtgtagcccctaatcctattgagagatccattgtctggacgatgacaatt
ccagaggatattgctctggctttcccagaagggccaacgatttgttatgtcgtactagtg
tatgaggctgaagaattttgtaaccttgttgctgatgaaaaatttctagaaaacatcaca
agagttcaggaccgatacccatcttatacggtgtgctgtctcaccaataagttaatgtct
tatgtaaagaaaagggaaaaggaagagtacaagaacccgggaagttggagacggcctccc
atcgatgaggtacttgcaaaattaactactcactatgtaagaatacattccagagactgt
gtagacgaggctgaggtctctgagcatgtagttggtttaactaccagtctggcttcttgt
cagttcaggaagaaactaactatgttatcagtaaacgctaatggtgcattagtctccaag
gattcagttgacaaacacttgattaaaaagagtccatggttaaaagcgttagtgacaatc
ccaaaggtgcagccaagatacgcggtagcagtgtggaagaaatatccatctatgaagtct
cttcttaaggtttatatggaccctaacatatcgattcatgagaaggagtttctactgaaa
gacttgaaagtggaaggtttagtaggaggagatataaggttaggtgcggtttgttcaaag
cggatatacagagttcttatgtctccaagtggaaccattaagactgatgatgttgaaaac
ggtgcagcttttttcacacagtag
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