Brassica rapa (field mustard): 103853306
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Entry
103853306 CDS
T03449
Name
(RefSeq) phospholipase D beta 2 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp00564
Glycerophospholipid metabolism
brp00565
Ether lipid metabolism
brp01100
Metabolic pathways
brp01110
Biosynthesis of secondary metabolites
brp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
103853306
00565 Ether lipid metabolism
103853306
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103853306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
brp04131
]
103853306
Enzymes [BR:
brp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
103853306
Membrane trafficking [BR:
brp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
103853306
Endosome - Golgi transport
Others
Others
103853306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
PLDc
C2
PLDc_2
Motif
Other DBs
NCBI-GeneID:
103853306
NCBI-ProteinID:
XP_009128477
LinkDB
All DBs
Position
A02:complement(15828018..15832922)
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AA seq
1001 aa
AA seq
DB search
MENYGSQYPYYPGPPPPPPNSDPYPPQAYPPPLHHQYGSMSHSGPLDYAHRPPPPLHHHY
GSMSPSGPPPHYSYDHQHQPYPYPPQQPTLQPHASFASYPPPPQHPPRPHDNFGSSSPPV
YPPLHDLMGALTLSSHHHPPSSNPGSYHGQPYHSFSTHSHLSHSGRLDSPLPHSPSLQIV
PSGKPSLKVLLLHGNLDILIYRANNLPNMDLFHNTLGAVFGSISNMIEGQLSKKITSDPY
VSISVAGAVIGRTYVMSNSENPVWHQHFYVPVAHHAAEVHFVVKDSDVVGSQLIGLVTIP
VEQIHSGARIEGTYSILSSNGKPCKPGATLTLSIQYTSADKLSVYHSGVGGGPSYQGVPG
TYFPLREGGNVTLYQDAHVPEGMLPRIRLGNGMYYENGKCWDDMFHAICQARRLIYITGW
SVWHNVRLARDKGNPASECTLGELLKSKSREGVRVLLLVWDDPTSRDILGYKTDGVMGTH
DEETRRFFKHSSVQILLCPRNAGKRHSWVKQTEVGTIYTHHQKTLIVDADAGGNRRKIVA
FVGGLDLCDGRYDTPQHPLFRTLQTDHKGDYHNPTFTGNLSGCPREPWHDLHSKIDGPAA
YDVLTNFEERWLKAAKPHRINKLKTSYDDALLRIERIPDILGVFDAPTVSANDPEAWHVQ
IFRSIDSNSVKGFPKDPKYATSKNLMCGKNVLIDMSIHTAYVKAIRAAQHFIYIENQYFI
GSSYNWNAHKDIGANNLIPMEIALKIADKIRANERFAVYIVIPMWPEGVPTGAATQRILY
WQHKTMQMMYGTIYNALVEAGLDDKFSPQDYLNFFCLGNREMVDGNNETNQSNENTPQAS
CRKSRRFMIYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARRQSG
PRGQIFGYRMSLWAEHMAMLDDSFEEPESLECVSKVRRMGEENWKQFRAEQVSEMRGHLL
KYPVEVDRRGKVRPLPGSEEFPDVGGNIVGSFLAIQENLTI
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggagaattatggttctcaatacccttattatccaggacctcctcctcctcctcccaac
tcagatccataccctccacaagcttatccaccgccacttcatcaccagtatggttctatg
tctcattctggtcctttggattatgcccaccgtcccccaccaccacttcaccaccactat
ggttctatgtccccttctggtccaccgcctcattattcttatgatcaccaacaccaacct
tacccttatcctcctcaacaacctacacttcagccccacgctagctttgcctcctatccc
ccaccccctcaacaccctcctcgacctcatgataatttcggatcgtcttccccacctgtt
taccctcctcttcatgaccttatgggtgctctcaccctttcttctcatcatcacccacca
tcttcaaaccccggctcctaccatggacagccttatcactccttttcaactcattctcat
ttgtctcactcgggcaggcttgattccccactcccacatagtcccagtttgcagattgtt
ccctctggtaaaccctccttgaaggtactcttgctgcatggtaacttggacattttgatt
tatcgtgccaataacctccctaacatggacttgttccataacacactgggtgccgtcttt
ggaagcataagcaacatgatcgaaggacagctgagcaagaagatcacgagcgacccttac
gtttccatttcagttgctggtgccgtcattggaagaacttacgtcatgagcaacagcgag
aaccctgtctggcaccagcacttttacgttcccgtcgctcatcatgccgccgaggtccat
tttgttgtcaaggacagtgatgttgtgggttctcagcttataggactcgtcaccatcccc
gtcgagcagatacactctggtgcaagaatcgaaggaacttactccattctgagcagcaat
gggaagccttgtaaacctggggccactctgacattatctattcagtacacctcagcggat
aaactcagtgtttatcacagcggagttggtggaggtcctagttaccagggtgtccctgga
acgtattttcctctccgggaaggtgggaacgtgacgctgtaccaagacgcacacgtacct
gaagggatgctcccgaggataagactcgggaacggaatgtattacgaaaacggaaagtgt
tgggatgatatgtttcatgccatatgtcaggctaggcgtttgatttacatcacgggttgg
tcagtgtggcataacgtcaggcttgctagggataaaggaaaccctgcatcggaatgtaca
cttggtgagctcctaaaatcaaagtcccgagaaggtgtgagagtcctgcttctcgtttgg
gacgaccctacttcacgagacatcttgggatacaaaacagatggagtgatgggaacccat
gacgaggagactcgccgtttttttaagcactcctcagttcaaatcttgctatgccctcga
aatgctggaaaacgacatagttgggtcaaacaaacggaagttggaaccatctacacacac
caccaaaagactttgatagtagatgctgatgctggcggtaacaggaggaaaatcgtagct
tttgtaggcggacttgatctctgtgatggccgatatgatacacctcaacatcccttgttt
aggacgcttcaaacagatcataaaggtgactaccacaaccccactttcacgggtaacctc
tccggttgtccaagagaaccttggcatgatctgcacagtaagattgatggcccagctgcg
tacgatgtcctgaccaattttgaggagaggtggctgaaggctgcgaagcctcacagaatc
aataaattgaagacgtcatatgatgatgcattgctcaggattgaaaggatcccagatata
ttaggagtctttgatgctcctactgttagcgcaaacgaccctgaggcttggcatgttcag
atcttccgttccatcgattcaaactctgtcaaaggtttcccaaaggatccaaaatatgct
acaagcaagaatttgatgtgcggtaagaacgtgctcatcgacatgagcatacacaccgca
tatgtaaaggccattcgtgcagctcaacacttcatctacattgagaaccagtatttcatt
ggatcctcttacaactggaatgctcacaaggatataggtgccaataacctgattcctatg
gaaattgctttgaagattgctgataagatcagggcaaatgaaaggtttgctgtctatatt
gtcatcccaatgtggccggaaggagttccaaccggcgctgctacacagaggattctatat
tggcagcacaagacaatgcaaatgatgtatgggactatctacaatgcgttagtggaggct
gggcttgatgataaattctccccacaagactatctaaattttttctgtcttggaaacaga
gagatggtggacggaaataatgaaacaaaccaaagcaacgagaacactcctcaggcatca
tgtcgaaagagcagaagatttatgatatatgtgcattcaaaagggatggttgttgatgac
gagtatgtggtaattggatctgcaaacataaaccaaagatcaatggaaggcacgagagac
acggagattgcaatgggagcttatcagcctcaacatacatgggcaagacgacagtctggt
cctcgcggtcagatattcgggtatagaatgtcactttgggcagaacacatggcaatgtta
gatgatagctttgaggagccagagagcctagagtgtgtaagcaaggtgagaagaatgggg
gaggagaactggaaacagtttagggcagagcaagtgtcggagatgaggggacatctgctc
aagtatccggtggaagttgatcggagaggcaaagtacggccactaccagggagcgaggag
ttccctgacgttgggggaaatattgttggatccttccttgccatacaggagaatcttaca
atctga
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