Brassica rapa (field mustard): 103856228
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Entry
103856228 CDS
T03449
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03008
Ribosome biogenesis in eukaryotes
brp03013
Nucleocytoplasmic transport
brp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103856228
03008 Ribosome biogenesis in eukaryotes
103856228
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103856228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
103856228
03009 Ribosome biogenesis [BR:
brp03009
]
103856228
03016 Transfer RNA biogenesis [BR:
brp03016
]
103856228
03036 Chromosome and associated proteins [BR:
brp03036
]
103856228
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103856228
Ribosome biogenesis [BR:
brp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
103856228
Pre-60S particles
103856228
Transfer RNA biogenesis [BR:
brp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
103856228
Chromosome and associated proteins [BR:
brp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103856228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
Mesothelin
Gpr1_Fun34_YaaH
Motif
Other DBs
NCBI-GeneID:
103856228
NCBI-ProteinID:
XP_009131574
LinkDB
All DBs
Position
A03:3325110..3332996
Genome browser
AA seq
1065 aa
AA seq
DB search
MAAEKLRDLSQPIDVGVLDATVSAFFVTGSKEERAAADQILRDLQANPDMWLQVVHILQN
TKSMDTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRSERLYVNK
LNVILVQIVKHDWPAKWTSFIPDLVAAAKTSETICENCMIILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFKLIHELCLYVLSASQRQDLIRSTLSALHAYLSWIPLGYIFESPLLET
LLKFFPVPAYRNLTLQCLTEVAALNFGDFYNVQYVKMYTMFIGQLQTILPPSTNIPEAYS
SGSDEEQAFIQNLALFFTSFFKFHIRVLESAPDTVSLLLTGLEYLINISYVDDTEVFKVC
LDYWNTLVLELFDAHHNSDNPAASINLMGLQMAQVLQRRQLYSNPMSKLRGLMINRMAKP
EEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQMLRKLTKQLSGE
EWAWNTLNTLCWAIGSISGSMAEDQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYV
VGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGER
EPFVSELLSGLASTVQDLEPHQIHSFYESVGNMIHAESDPLKRDEYLRRLMELPNEKWAE
IIGQARHSVEVLKDPVVIRTVLNILQTNTSAATSLGTDFLSQISLIFLDMLNVYRMYSEL
VSTSITDGGPYASKTSFVKLLRSVKRETLKLIETFLDKAEDQPHIGKQFVSPMMEYVLAD
YARNVPDARESEVLSLFATIINKYKATMLDDVPNIFEAVFQCTLEMITKNFEDYPEHRLK
FFSLLRAIATFCFPALIKLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQQS
AFCNQFFRSYFIQIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGALTEPLWDTATV
PYPYPNNAAFVREYTIKLLSSSFPNMTAAEVTQFVNGLYESRNDPSEFKKNIRDFLVQSK
EFSAQDNKDLYAEEAAAQREQERQRMLSIPGLVAPNEIQDEMVDS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagaagctaagagacttgagccagccgattgacgtcggcgtgctcgatgcc
actgtttccgccttcttcgttaccggatctaaggaagagagagctgctgccgatcagatt
ctgcgggatttgcaagctaatcctgacatgtggcttcaagttgtacacattcttcagaac
acaaagagcatggatactaagttctttgcccttcaggttctagaaggtgttataaagtac
agatggaatgcactacctgttgaacaacgagatggaatgaaaaattacatctcggaggtc
attgtacagctctccagtaacgaagcatctttcagatcggaaaggctctatgtcaacaag
ctcaatgttatcttggttcagatagtgaagcatgattggccggcaaagtggacaagcttc
attcccgatctagttgcggctgctaaaaccagcgaaactatctgcgaaaattgcatgatc
attttgaaactcctaagcgaagaggtttttgatttctcaagaggagaaatgactcagcag
aagataaaagagctgaaacaatctctaaacagcgagtttaaactcattcacgagttatgc
ctctatgtcctctcagcttctcaaagacaggatcttatacgctcaacactctctgcgttg
catgcctatctttcatggattccgttaggctatatttttgagtctcctttgcttgagacc
ctccttaaattctttcctgtgccagcatataggaatctcacgcttcaatgcctgaccgag
gttgcagctctcaacttcggagatttttacaatgtgcaatatgtcaagatgtacaccatg
tttatagggcagctgcagaccattcttccaccaagtacaaatatccctgaggcatattca
agcggaagtgatgaagaacaagcatttatccagaacctggcactttttttcacttcgttt
ttcaagtttcatatacgagtcttggaatcagcgccagataccgtttccttattacttacg
ggtctcgaatatctcatcaatatatcatatgttgatgacactgaagtctttaaggtctgt
ttggactactggaacacgttggtgttggagctgtttgatgcacatcataattctgataac
cctgcagcaagtataaacctgatgggattgcagatggctcaagtcctgcaacggcgtcaa
ctttattctaatccaatgtccaaactaagagggttaatgatcaaccgcatggcgaagcct
gaagaagtgcttattgttgaagatgaaaatgggaatatcgtccgtgaaactttgaaggac
aatgatgttcttgtccagtataagataatgcgggagacattaatctatctctcacatctt
gaccacgatgatactgaaaagcagatgttgaggaagctaaccaaacaattaagcggggag
gaatgggcatggaacactttgaatacactatgctgggctattgggtctatttctggatct
atggcagaagatcaggaaaacagatttttggtcatggtcattcgagatttgttaaattta
tgtgagattaccaagggaaaagacaataaagccgtcattgctagcaacattatgtatgtc
gtcggtcagtatccaaggtttttaagggcccattggaagtttctgaaaacagttgtgaat
aagctgtttgagtttatgcatgagacgcatcctggtgttcaggacatggcgtgtgatacg
ttcttgaaaatagttcagaagtgcaagcgtaaatttgttattgttcaggttggagagagg
gaaccatttgtatctgaacttctatctggccttgcatccactgttcaagatcttgagcct
catcagattcactcattttatgaatctgttggtaatatgatccatgcagaatcagatcct
ctgaagagagatgaatatctacggaggttgatggaactcccaaacgagaaatgggcagaa
atcataggacaggcacgccatagtgtagaagtcctcaaggatccagttgtgatacgtaca
gtgcttaatattctacagacgaacactagtgctgctacttcactaggaacggacttctta
tcccaaatttccttaatatttttagatatgctgaacgtatacagaatgtacagtgagctt
gtgtcaaccagcattactgatgggggcccatatgcgtccaagacatcttttgtaaaactt
ttaagatctgttaagagggaaacccttaagctgatagaaaccttcttagacaaagccgaa
gaccaaccgcacatagggaaacaatttgtgtctccaatgatggagtatgtacttgccgac
tatgcgaggaatgtgcctgatgctagggaatcagaagttctttcactttttgcaacgatt
ataaacaagtacaaggcaacaatgttagatgacgtgccaaacatatttgaagctgttttc
cagtgtacattggagatgataactaagaacttcgaagattatccggaacaccgcctcaag
tttttctcattactccgtgctattgctacattttgtttccctgccttgataaagttgtca
agtcagcaactgaagctagtgatggattcaattatctgggcatttagacatactgagaga
aacatcgctgaaactgggcttaatcttttgcttgagatgctgaagaactttcagcaatct
gcgttttgtaatcaattcttccggtcatacttcatacaaatagagcaagaaatatttgct
gtgttgactgataccttccataagcctggcttcaagctgcatgtgctggtgctccagcat
ctgttttgcctggttgagagcggtgctttaactgaacctttgtgggatactgcaaccgta
ccttatccctatccgaacaacgctgcctttgttcgtgaatacaccattaagctattgagc
tcttcattcccaaacatgactgcagcagaggtcacacaatttgtgaatggactctacgag
tcgagaaatgacccgtctgaattcaagaaaaacattcgcgacttccttgtgcagtccaag
gaattttctgctcaggataacaaggatttgtatgctgaggaagcagcagcgcagagagag
caagagcgtcaaagaatgctttcgattcctgggcttgttgctcctaatgagattcaagac
gagatggtcgactcctaa
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integrated database retrieval system
