Brassica rapa (field mustard): 103869299
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Entry
103869299 CDS
T03449
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
brp
Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
brp01002
]
103869299
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
brp04121
]
103869299
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brp04147
]
103869299
Enzymes [BR:
brp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103869299
Peptidases and inhibitors [BR:
brp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103869299
Ubiquitin system [BR:
brp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103869299
Exosome [BR:
brp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103869299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
103869299
NCBI-ProteinID:
XP_009145607
UniProt:
M4F3W2
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All DBs
Position
A05:20029839..20035383
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AA seq
797 aa
AA seq
DB search
MELLRSNLSRVQIPEPTHRIYKHECCLSFDTPRSEGGLFVDMNSFLAFGKDYVAWNHEKT
GNPVYLHIKETPKSVPEDRPLKKPTLLAIGVDGGFDNNETEYEESYSIVILPDFVSLPFP
SVELPEKVRIAVDTVLSAVGAERREQVAAWTAEEKKASEHALTLQQIKSGVVIPPSGWKC
AKCDKKENLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETSYPLAVKLGTITADLEAAD
VYSYPEDDSVLDPLLAQHLAHFGIDFSSMQKTEMTTAERELDQNTNFDWNRIQESGKELV
PVFGPGYTGLVNLGNSCYLAATMQILFSTHSFISRYFSHQSLKLAFEMAPADPTLDLNMQ
LTKLGHGLLSGKYSIPVTEKDAATAEARQEGIPPRMFKSVVAAGHGEFSSMRQQDALDFF
LHLLDKVERGNNTKPDLDPSRSFKFGVEEKILCSSGKVSYNKRDDCILSLNIPLQEATNK
DELEAFNNQKAGKGLEENNMSTDDIVRPRVPLEACLATFASPEQIHDYYSTALKGKTTAI
KTTGLTSFPDYLVLHMRKFVMDAGWVPKKLDVYIDVPDVIDISHMRSKGLQPGEELLPDA
VPEEVMETAQPVANEEIVAQLVSMGFNQLHCQKAAINTSNVGVEEATNWLFSHMDDPDID
APISHQASDVDQSSVDTLISFGFAEEVARKALKASGGDIEKATDWIFNNPNASVSDMDVS
SSSSAQTPAQTGLPDGGGRYKLFGIVSHMGTSTHCGHYVAHILKEGRWVIFNDSKVGIST
DPPKDMGYLYFFQRLEN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagcttctccgatccaacttgtctagggttcagatccccgaacccacccaccgcatc
tacaagcacgagtgttgcctctccttcgacaccccgagatcggaaggaggattgttcgta
gacatgaacagcttccttgcttttggaaaagactacgttgcttggaatcacgagaagacg
gggaatcctgtttacctccacatcaaggagactcccaagtctgttcccgaggatcgccct
ctcaagaaacctactctcctcgctattggtgttgatggaggatttgacaacaatgagact
gagtatgaggaatcttatagcatagtcattcttccggattttgtttcacttcctttccct
tctgttgaactaccagagaaggtgaggattgcggttgatactgtactgagtgccgttggt
gctgagcggagagagcaagttgcagcttggacagctgaggagaagaaagctagtgaacat
gcattgacgctgcagcagatcaagagcggcgttgttattcctccctctggttggaaatgt
gccaagtgtgataagaaggagaatctctggcttaatcttaccgatgggatgattctctgt
gggaggaaaaactgggatgggactggtggaaacaaccatgctgttgagcactacaaggaa
acaagctaccctcttgctgtaaagcttggaactatcaccgctgacttggaagcagcagat
gtttattcctacccggaagatgacagtgttttggacccactcctggctcagcatctggcc
cattttggaatcgacttctcctcgatgcagaagacagaaatgacaactgccgaaagagaa
cttgatcaaaatacgaattttgattggaaccgtatacaagagagtggaaaagaattggtg
ccagtttttggacctggatatactggacttgtcaatcttgggaacagttgctacttggca
gctacgatgcagattcttttctcgacccattcgtttatttcaagatacttctcacatcag
agcttaaagttggcatttgaaatggctcctgctgatccaactttggacctcaatatgcaa
ttgacaaagcttggacatggtttactatctgggaagtactctattcctgtaacagagaag
gatgctgcaactgcagaagctaggcaagaaggaatccctcctcgcatgttcaaatcggta
gttgctgctggccatggagagttctcttctatgagacagcaggatgctctcgactttttc
ctccacttgctagataaagttgagcgtggcaacaacacgaaaccagatttagacccctcg
aggagcttcaagtttggagtagaagaaaagatcctttgttcatctgggaaggtctcatat
aataagagggatgactgtattctttctttgaacattccactgcaggaggcaactaataaa
gatgaattagaagcctttaacaaccagaaagcaggcaaaggattggaagaaaataatatg
tcaactgatgatattgtacgcccacgagttcctttagaagcttgtctagcaacgtttgca
tcaccagagcagattcatgattactacagcactgctctgaagggaaagacaacagctatc
aagacaactggtttgacatctttcccagattacttggtcttgcacatgcggaagtttgtt
atggatgcaggctgggtgccaaagaagcttgatgtgtacattgatgttccggatgtaatt
gatatcagccacatgcgcagcaaagggcttcaacctggagaagaactgttgccagatgcc
gttccagaagaagtgatggaaactgcacagcctgtggccaatgaggagatagttgcacaa
ctcgtctcaatgggatttaaccagcttcattgccagaaagccgccataaatacgtctaat
gttggggttgaagaggcgacgaactggctattttctcacatggatgatccagatatcgac
gcaccaatctcccatcaggcatctgacgttgaccaatcaagcgttgataccttaatctcc
tttggttttgctgaagaggttgctcgaaaggcactcaaagcctcgggaggagatatagag
aaagcaacagattggatattcaacaaccctaatgcatctgtttcagacatggacgtttcc
tctagcagttcagcgcaaactccagctcagactggactaccagatggaggagggagatat
aagctgtttgggatagtaagccacatgggaacatcaacgcactgtggtcactatgtggca
cacatattgaaagaaggtcgttgggtcatattcaatgacagcaaagtaggtatctcgaca
gatcctcctaaagacatgggttatctctacttctttcagcgtctcgaaaactga
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